| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra006683 |
| Family | AA1 |
| Protein Properties | Length: 574 Molecular Weight: 63670.1 Isoelectric Point: 9.4495 |
| Chromosome | Chromosome/Scaffold: 03 Start: 4611941 End: 4613968 |
| Description | laccase 17 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 23 | 566 | 0 |
| KTRHYTLDIKMHNVTRLCHTKSLVSVNGEFPGPKLIAREGDQLLIKVVNHVPNNISLHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNYTVVGQRGTL WYHAHISWLRATVYGPLIILPKHGVPYPFHKPHKEVPMVFGEWFNADTEAIIRQATLTGGGPSVSDAYTINGLPGPLYNCSAKDTFRLRVKPGKTYLLRL INAALNDELFFSIANHTVTVVEADAIYVKPFETDTILIAPGQTTNLLLKTKQSYPKASFLMTARPYVTGQGTFDNSTVAGILEYEQPKHTKTSIKKNLQL FTPVLPALNDTNFATKFSNKLRSLNSKKFPANVPLKVDRKFFFTVGLGTNPCNHKNNQTCQGPTNTTMFAASISNISFTMPTKALLQSHYSGQSNGVYSP NFPWSPIVPFNYTGTPPNNTMVSTGTNLMVLPYNTSVELVMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDAKEDPKNFNLVDPIERNTVGVPSGGWAA IRFLADNPGVWFMHCHLEVHTSWGLRMAWLVLDGDKPDQKLLPP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 574 Download |
| MAFWLLFAVF SSVLLLPEPA FGKTRHYTLD IKMHNVTRLC HTKSLVSVNG EFPGPKLIAR 60 EGDQLLIKVV NHVPNNISLH WHGIRQLRSG WADGPAYITQ CPIQTGQSYV YNYTVVGQRG 120 TLWYHAHISW LRATVYGPLI ILPKHGVPYP FHKPHKEVPM VFGEWFNADT EAIIRQATLT 180 GGGPSVSDAY TINGLPGPLY NCSAKDTFRL RVKPGKTYLL RLINAALNDE LFFSIANHTV 240 TVVEADAIYV KPFETDTILI APGQTTNLLL KTKQSYPKAS FLMTARPYVT GQGTFDNSTV 300 AGILEYEQPK HTKTSIKKNL QLFTPVLPAL NDTNFATKFS NKLRSLNSKK FPANVPLKVD 360 RKFFFTVGLG TNPCNHKNNQ TCQGPTNTTM FAASISNISF TMPTKALLQS HYSGQSNGVY 420 SPNFPWSPIV PFNYTGTPPN NTMVSTGTNL MVLPYNTSVE LVMQDTSILG AESHPLHLHG 480 FNFFVVGQGF GNFDAKEDPK NFNLVDPIER NTVGVPSGGW AAIRFLADNP GVWFMHCHLE 540 VHTSWGLRMA WLVLDGDKPD QKLLPPPADL PKC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 2.0e-51 | 30 | 146 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 7.0e-61 | 20 | 547 | 559 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 2.0e-69 | 22 | 549 | 562 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 3.0e-84 | 24 | 547 | 558 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 22 | 573 | 553 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_200810.1 | 0 | 1 | 573 | 1 | 577 | LAC17 (laccase 17); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002299296.1 | 0 | 5 | 573 | 14 | 581 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329138.1 | 0 | 2 | 573 | 10 | 581 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002520231.1 | 0 | 10 | 573 | 19 | 580 | laccase, putative [Ricinus communis] |
| RefSeq | XP_002531824.1 | 0 | 9 | 573 | 19 | 576 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 23 | 547 | 2 | 517 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1asq_A | 0 | 23 | 547 | 2 | 517 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1asp_B | 0 | 23 | 547 | 2 | 517 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1asp_A | 0 | 23 | 547 | 2 | 517 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1aso_B | 0 | 23 | 547 | 2 | 517 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
