| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra006967 |
| Family | CE6 |
| Protein Properties | Length: 283 Molecular Weight: 30976.6 Isoelectric Point: 5.3294 |
| Chromosome | Chromosome/Scaffold: 09 Start: 26572635 End: 26574345 |
| Description | Domain of unknown function (DUF303) |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE6 | 97 | 190 | 3.3e-26 |
| GPGMPFANRVVNRFGYVGLVPCSIGGTKLSQWQKGEFLYEETVRRAKAAMLASGGGSYEAVLWYQGESDTVDMVDASVYKNRLVQFFSDLRNDL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 283 Download |
| MIFFLFIMMF GLSSLQIQSQ TIPRNISIFI LAGQSNMAGR GGVYNDTAKN ITVWDGVIPR 60 ECRSNPSILR LTAKLEWEEA NEPLHADIDV NKTNGVGPGM PFANRVVNRF GYVGLVPCSI 120 GGTKLSQWQK GEFLYEETVR RAKAAMLASG GGSYEAVLWY QGESDTVDMV DASVYKNRLV 180 QFFSDLRNDL QHPNLPIIQV ALATGAGPYL DAVRKAQLET GLENVHCVDA KGLPLEPDGL 240 HLTTSSQVRL GEMMVDAFLA IPNSAELHSG FSVLVLFCLF FL* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03629 | DUF303 | 6.0e-30 | 28 | 261 | 281 | + Domain of unknown function (DUF303). Distribution of this domain seems limited to prokaryotes and viruses. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB86905.1 | 0 | 37 | 200 | 1 | 164 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_190869.3 | 0 | 13 | 282 | 16 | 285 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002283036.1 | 0 | 25 | 259 | 26 | 253 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002327179.1 | 0 | 13 | 259 | 13 | 257 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510156.1 | 0 | 1 | 259 | 1 | 258 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2apj_D | 0 | 11 | 260 | 9 | 257 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_C | 0 | 11 | 260 | 9 | 257 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_B | 0 | 11 | 260 | 9 | 257 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_A | 0 | 11 | 260 | 9 | 257 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 1zmb_F | 2e-20 | 26 | 259 | 2 | 225 | A Chain A, Crystal Structure Of The Putative Acetylxylan Esterase From Clostridium Acetobutylicum, Northeast Structural Genomics Target Car6 |
