Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra007313 |
Family | GH17 |
Protein Properties | Length: 317 Molecular Weight: 35373.1 Isoelectric Point: 6.0489 |
Chromosome | Chromosome/Scaffold: 09 Start: 28534364 End: 28535314 |
Description | beta-1,3-glucanase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 8 | 315 | 0 |
IGVCYGRLGNPRPSPSDVVALYKHRNIQRMRIYDPDHDTLNALRNSNIELILDVPKADLERIASSQAEADTWIRNNVKNYEGVRFRYITVGNEVEPSEPA ARALFQAMKNIDNAVSRAGLGIKVSTAIDMGATMDTYPPSHGRFRDDYINFLQPVIGFLVSKQSPLLLNSYPYFSYKDDMKDIPLEYALFKPTPPVIDGQ YSYHNLFDAQLDAVYAALEKSGGGSLEVVVSESGWPTQGGAGTSVENAMTYVNNLIQHVKSGTPRKPGKAIEAYIFAMFDENQKGPLELEKFWGMFLPNQ QPKYNVNF |
Full Sequence |
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Protein Sequence Length: 317 Download |
MIYIAAQIGV CYGRLGNPRP SPSDVVALYK HRNIQRMRIY DPDHDTLNAL RNSNIELILD 60 VPKADLERIA SSQAEADTWI RNNVKNYEGV RFRYITVGNE VEPSEPAARA LFQAMKNIDN 120 AVSRAGLGIK VSTAIDMGAT MDTYPPSHGR FRDDYINFLQ PVIGFLVSKQ SPLLLNSYPY 180 FSYKDDMKDI PLEYALFKPT PPVIDGQYSY HNLFDAQLDA VYAALEKSGG GSLEVVVSES 240 GWPTQGGAGT SVENAMTYVN NLIQHVKSGT PRKPGKAIEA YIFAMFDENQ KGPLELEKFW 300 GMFLPNQQPK YNVNFN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-7 | 23 | 303 | 289 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-146 | 8 | 315 | 311 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL30426.1 | 0 | 5 | 316 | 32 | 343 | AF435089_1 beta-1,3-glucanase [Prunus persica] |
GenBank | AAM63339.1 | 0 | 5 | 316 | 29 | 339 | beta-1,3-glucanase 2 (BG2) (PR-2) [Arabidopsis thaliana] |
GenBank | ABC94638.2 | 0 | 5 | 316 | 33 | 341 | basic glucanase [Brassica juncea] |
RefSeq | NP_191283.2 | 0 | 6 | 316 | 33 | 341 | BG3 (BETA-1,3-GLUCANASE 3); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_191285.1 | 0 | 3 | 316 | 27 | 339 | BGL2 (BETA-1,3-GLUCANASE 2); cellulase/ glucan 1,3-beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 7 | 316 | 1 | 316 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3f55_C | 0 | 7 | 316 | 1 | 316 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3f55_B | 0 | 7 | 316 | 1 | 316 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3f55_A | 0 | 7 | 316 | 1 | 316 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3em5_D | 0 | 7 | 316 | 1 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EE526676 | 198 | 5 | 202 | 0 |
EL784282 | 317 | 5 | 317 | 0 |
ES954235 | 190 | 124 | 313 | 0 |
EX268938 | 306 | 5 | 307 | 0 |
DY278959 | 317 | 5 | 315 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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