y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra007510 |
Family | GH1 |
Protein Properties | Length: 583 Molecular Weight: 67412.8 Isoelectric Point: 6.7999 |
Chromosome | Chromosome/Scaffold: 09 Start: 29566274 End: 29573770 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 29 | 504 | 0 |
HSFPDGFIFGTAASAYQYEGATSEGGKSPAIWDHFSRTYPERTKMHNADVAIDFYHRYKDDIKLMKELNMDAFRFSISWARLIPSGKLKDGVNKEGVQFY KDLIDELLANDIQPSMTLYHWDHPQSLEDEYGGFLSPKIVEDFRDFAKVCFEEFGDKVKMWTTINEPYIMTIAGYDQGNKAAGRCSKWVSEKCHAGDSST EPYIVSHNVLLAHAAAVDEFRKCKKTSADGQIGIVLSPRWFEPYHSDSTDDKEAAERALAFEFGWHLDPVIHGDYPEIVKKYAGKKLPSFTVEQSNMLKK SSDFVGINYYTARFASHLPHIDPAKPRFKTDHYVEWKLTNHSGHIIGPGDERGLILSYPEGLRKVLNYIKDRYNNMPVYIKENGINENDDGTRPREEILK DTFRIEYHDKHFQQLHKAIVEDGCDVRGYYAWSLMDNFEWEHGYTARFGLYYVDFVNGLKRYPKDSVKWFKRFLNR |
Full Sequence |
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Protein Sequence Length: 583 Download |
MARGYRFFII LSVISLFAET IDSRILDRHS FPDGFIFGTA ASAYQYEGAT SEGGKSPAIW 60 DHFSRTYPER TKMHNADVAI DFYHRYKDDI KLMKELNMDA FRFSISWARL IPSGKLKDGV 120 NKEGVQFYKD LIDELLANDI QPSMTLYHWD HPQSLEDEYG GFLSPKIVED FRDFAKVCFE 180 EFGDKVKMWT TINEPYIMTI AGYDQGNKAA GRCSKWVSEK CHAGDSSTEP YIVSHNVLLA 240 HAAAVDEFRK CKKTSADGQI GIVLSPRWFE PYHSDSTDDK EAAERALAFE FGWHLDPVIH 300 GDYPEIVKKY AGKKLPSFTV EQSNMLKKSS DFVGINYYTA RFASHLPHID PAKPRFKTDH 360 YVEWKLTNHS GHIIGPGDER GLILSYPEGL RKVLNYIKDR YNNMPVYIKE NGINENDDGT 420 RPREEILKDT FRIEYHDKHF QQLHKAIVED GCDVRGYYAW SLMDNFEWEH GYTARFGLYY 480 VDFVNGLKRY PKDSVKWFKR FLNRSNGETK EVKEVSHEKS RSYGNKTLHE LVQKKKKKTL 540 HEQVSFDESA GFFVSFMAAN QSTRDEEQNR CSFDSTYPTS IY* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 8.0e-142 | 10 | 502 | 502 | + beta-glucosidase | ||
COG2723 | BglB | 3.0e-146 | 31 | 513 | 489 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
PLN02814 | PLN02814 | 6.0e-148 | 1 | 503 | 505 | + beta-glucosidase | ||
TIGR03356 | BGL | 4.0e-150 | 32 | 498 | 470 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 2.0e-175 | 30 | 508 | 482 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC16092.1 | 0 | 7 | 573 | 5 | 553 | putative beta-glucosidase [Arabidopsis thaliana] |
GenBank | AAG23719.1 | 0 | 1 | 574 | 1 | 558 | beta-glucosidase [Arabidopsis thaliana] |
RefSeq | NP_001118524.1 | 0 | 6 | 514 | 4 | 517 | BGLU29 (BETA GLUCOSIDASE 29); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_191573.1 | 0 | 1 | 574 | 1 | 558 | DIN2 (DARK INDUCIBLE 2); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_850416.1 | 0 | 7 | 573 | 5 | 558 | BGLU28 (BETA GLUCOSIDASE 28); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 26 | 502 | 29 | 503 | A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator |
PDB | 3ptq_A | 0 | 26 | 502 | 29 | 503 | A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator |
PDB | 3ptm_B | 0 | 26 | 502 | 29 | 503 | A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator |
PDB | 3ptm_A | 0 | 26 | 502 | 29 | 503 | A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator |
PDB | 3ptk_B | 0 | 26 | 502 | 29 | 503 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |