| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra007554 |
| Family | CE8 |
| Protein Properties | Length: 522 Molecular Weight: 58148.3 Isoelectric Point: 9.5283 |
| Chromosome | Chromosome/Scaffold: 09 Start: 29776008 End: 29778345 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 208 | 506 | 0 |
| FVVAKDGSATHRSISEALAAVSRMGKSRTNRGIIYIKAGVYNEKIEIDRHMKNIMLVGDGMDRTIITNNRNVPDGSSTYGSATFGVSGDGFWARDMTFEN TAGPHKHQAVALRVNSDLSVFYRCSFRGYQDTLFTHSLRQFYRDCHIYGTIDFIFGDASAVFQNCDIFVRRPMDHQGNMITAQGRDNPHENTGISIQNSR VRASPEFEAVKGQFKSYLGRPWKKYSRTVFLKTDLDGLIDPRGWREWRGDFALSTLYYGEFMNTGSGAGTSRRVSWPGFHVLHGADEASPFTVSRFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 522 Download |
| MYSFVKATDF FTILFFLATA TVAISFNTSE LDVLERARAS VVEARTRFGS MATVEATNEV 60 ARSYYSLGLS DCEKLYDESE ARLSNLVVAH ENFTVEDVRT WLSGVLANHH TCLDGLDQSR 120 QGDKPLVHSN ITVVLGEALA FYKKTRGHLK KRRPNHAPTR QHHATTRPHH GPTRPNHGPA 180 RPYHGPARPN QSGGMLVSWN PTGSRADFVV AKDGSATHRS ISEALAAVSR MGKSRTNRGI 240 IYIKAGVYNE KIEIDRHMKN IMLVGDGMDR TIITNNRNVP DGSSTYGSAT FGVSGDGFWA 300 RDMTFENTAG PHKHQAVALR VNSDLSVFYR CSFRGYQDTL FTHSLRQFYR DCHIYGTIDF 360 IFGDASAVFQ NCDIFVRRPM DHQGNMITAQ GRDNPHENTG ISIQNSRVRA SPEFEAVKGQ 420 FKSYLGRPWK KYSRTVFLKT DLDGLIDPRG WREWRGDFAL STLYYGEFMN TGSGAGTSRR 480 VSWPGFHVLH GADEASPFTV SRFIQGDSWI PITGVPFSAG V* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02201 | PLN02201 | 4.0e-154 | 69 | 521 | 473 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 9.0e-163 | 96 | 520 | 440 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 1.0e-171 | 68 | 521 | 461 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02916 | PLN02916 | 0 | 25 | 521 | 500 | + pectinesterase family protein | ||
| pfam01095 | Pectinesterase | 0 | 207 | 507 | 301 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB82677.1 | 0 | 1 | 521 | 1 | 496 | pectinesterase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_191632.2 | 0 | 1 | 521 | 1 | 519 | pectinesterase family protein [Arabidopsis thaliana] |
| Swiss-Prot | Q84R10 | 0 | 1 | 521 | 1 | 519 | PME36_ARATH RecName: Full=Probable pectinesterase/pectinesterase inhibitor 36; Includes: RecName: Full=Pectinesterase inhibitor 36; AltName: Full=Pectin methylesterase inhibitor 36; Includes: RecName: Full=Pectinesterase 36; Short=PE 36; AltName: Full=Pectin methylesterase 36; Short=AtPME36; Flags: Precursor |
| RefSeq | XP_002274478.1 | 0 | 10 | 521 | 4 | 485 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002511680.1 | 0 | 25 | 521 | 6 | 472 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 207 | 521 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 206 | 521 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 4e-26 | 209 | 479 | 7 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 4e-26 | 209 | 479 | 7 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 8e-26 | 209 | 479 | 7 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
