| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra007573 |
| Family | GT8 |
| Protein Properties | Length: 674 Molecular Weight: 77080.4 Isoelectric Point: 10.068 |
| Chromosome | Chromosome/Scaffold: 09 Start: 29851720 End: 29854485 |
| Description | galacturonosyltransferase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 334 | 646 | 0 |
| CLSMRLTIDYYLLSPEKRKFPRRENRENPNLYHYALFSDNVLAASVVVNSTIMNAKDPSKHVFHLVTDKLNFAAMNMWFLLNPPGKATIHVENVDEFKWL NSSYCPVLRQLESAAMKEYYFKADHPSSGSSNLKYRNPKYLSMLNHLRFYLPEVYPKLNKILFLDDDIIVQKDLTPLWEVNLNGKVNGAVETCGESFHRF DKYLNFSNPHIARNFNPNACGWAYGMNMFDLKEWKKRDITGIYHKWQNMNENRTLWKLGTLPPGLITFYGLTHPLDKSWHVLGLGYNPSIAKKDIQNAAV VHYNGNMKPWLEL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 674 Download |
| MALKRGLSGV NRIRGGGGGG GGGSRSAFIL LVFFCVFAPL VFFVGRGVYI DSSNDYSNDS 60 VKQDLDWRER LAMKSLRSLF SKEASVLDVI TASTADLGPF SLDSFKKNNL SASYREVDTS 120 VRNSQNQTTS SALNAKGDIT SKGGSHQKVE TPAKFYRRQL REKRREMRAN ELVKRNVDTI 180 LKLENAAIER SKSVDSAVLG KYSIWRRENE NDNSDSNIRL MRDQVIMARV YCGIAKLKNK 240 TELLQELQAR IKDSQRVLAE ATTDADLPRS AHDKLRDMGQ VLSKAKMQLY DCKLVTGKLR 300 AMLQTADEQV RSLKKQSTFL AQLAAKTIPN PIHCLSMRLT IDYYLLSPEK RKFPRRENRE 360 NPNLYHYALF SDNVLAASVV VNSTIMNAKD PSKHVFHLVT DKLNFAAMNM WFLLNPPGKA 420 TIHVENVDEF KWLNSSYCPV LRQLESAAMK EYYFKADHPS SGSSNLKYRN PKYLSMLNHL 480 RFYLPEVYPK LNKILFLDDD IIVQKDLTPL WEVNLNGKVN GAVETCGESF HRFDKYLNFS 540 NPHIARNFNP NACGWAYGMN MFDLKEWKKR DITGIYHKWQ NMNENRTLWK LGTLPPGLIT 600 FYGLTHPLDK SWHVLGLGYN PSIAKKDIQN AAVVHYNGNM KPWLELAMSK YRPYWTKYIK 660 FDHPYLRRCN LHE* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02910 | PLN02910 | 0 | 171 | 673 | 506 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 0 | 215 | 671 | 457 | + Probable galacturonosyltransferase | ||
| PLN02742 | PLN02742 | 0 | 213 | 672 | 467 | + Probable galacturonosyltransferase | ||
| PLN02523 | PLN02523 | 0 | 267 | 670 | 409 | + galacturonosyltransferase | ||
| PLN02718 | PLN02718 | 0 | 25 | 673 | 668 | + Probable galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK62572.1 | 0 | 1 | 610 | 1 | 610 | AT3g61130/T20K12_30 [Arabidopsis thaliana] |
| EMBL | CBI38820.1 | 0 | 46 | 673 | 42 | 681 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_191672.1 | 0 | 1 | 673 | 1 | 673 | GAUT1 (GALACTURONOSYLTRANSFERASE 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002272447.1 | 0 | 46 | 673 | 90 | 729 | PREDICTED: similar to GAUT1/LGT1 (Galacturonosyltransferase 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Vitis vinifera] |
| RefSeq | XP_002511763.1 | 0 | 86 | 673 | 111 | 710 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ga8_A | 0.00008 | 470 | 579 | 75 | 176 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1g9r_A | 0.00008 | 470 | 579 | 75 | 176 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 1ss9_A | 0.00008 | 470 | 643 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
