| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra007593 |
| Family | GT90 |
| Protein Properties | Length: 531 Molecular Weight: 62543 Isoelectric Point: 9.483 |
| Chromosome | Chromosome/Scaffold: 09 Start: 29933697 End: 29942006 |
| Description | Arabidopsis thaliana protein of unknown function (DUF821) |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT90 | 197 | 446 | 0 |
| IPDLELLFLCYDKPVIWKRDFNKTREDTWPPPPLFRYCGHRDAYDIVFPDWSFWGWPEVNIKEWKKLSVALQEGNKRVKWKDRIPYAYWKGNPHVSTPIR KELMRCNFSDKYDPMLRLYAQDWRNETKKGFKGSNLEDQCTHRYKIYIEGEAWSVSEKYILSCDSMTLLVKPEYHDFFIRSMIPMKHYWPIRQNNKCGDL KFAVEWGNNNTDKAQVIGRQGSDYIMKNLEMKYVYDYMFYVLQGYGKLMK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 531 Download |
| MRENIHVAQA TEHHHHQQQH KIATNLSSKL AKTRVTAKIH IFVFFIFLLS ASLSWIFFTF 60 VLGESRFQVI SVFTRNTNKS ATTITTIPKT IPLNCTLLNN ATTQTCPSNY PTKFEPTISS 120 SETCPDYFRW IQQDLKVWQE TGITRETLER AKPNAHFRVV IKSGRLYVDQ YVKSYQTRDV 180 FTIWGILQLL RTYPGQIPDL ELLFLCYDKP VIWKRDFNKT REDTWPPPPL FRYCGHRDAY 240 DIVFPDWSFW GWPEVNIKEW KKLSVALQEG NKRVKWKDRI PYAYWKGNPH VSTPIRKELM 300 RCNFSDKYDP MLRLYAQDWR NETKKGFKGS NLEDQCTHRY KIYIEGEAWS VSEKYILSCD 360 SMTLLVKPEY HDFFIRSMIP MKHYWPIRQN NKCGDLKFAV EWGNNNTDKA QVIGRQGSDY 420 IMKNLEMKYV YDYMFYVLQG YGKLMKLDVT VPENATEVCS ETMACPITDG RLIRQCMDDS 480 LVMSPSVKAA CNLPKPYGDY ELKRILKKRQ SAERKVMKWT DEYWNLRSGK * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03463 | osq_cycl | 0.0002 | 170 | 248 | 85 | + 2,3-oxidosqualene cyclase. This model identifies 2,3-oxidosqualene cyclases from Stigmatella aurantiaca which produces cycloartenol , and Gemmata obscuriglobus and Methylococcus capsulatus which each produce the closely related sterol, lanosterol. | ||
| pfam05686 | Glyco_transf_90 | 1.0e-39 | 403 | 520 | 118 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
| pfam05686 | Glyco_transf_90 | 7.0e-97 | 119 | 317 | 212 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
| smart00672 | CAP10 | 6.0e-114 | 196 | 448 | 259 | + Putative lipopolysaccharide-modifying enzyme. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF01419.1 | 0 | 60 | 501 | 54 | 491 | hypothetical protein [Arabidopsis thaliana] |
| EMBL | CAB71058.1 | 0 | 193 | 530 | 2 | 338 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_182108.2 | 0 | 60 | 501 | 54 | 491 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_191687.2 | 0 | 1 | 530 | 1 | 536 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_191688.1 | 0 | 92 | 501 | 17 | 421 | unknown protein [Arabidopsis thaliana] |
