| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra007722 |
| Family | CE10 |
| Protein Properties | Length: 359 Molecular Weight: 40213.5 Isoelectric Point: 6.7477 |
| Chromosome | Chromosome/Scaffold: 09 Start: 30558594 End: 30559879 |
| Description | alpha/beta-Hydrolases superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE10 | 67 | 337 | 0 |
| DHVDTSTNLLTRIYLPAPLDPSRHGSVDLTEPLSTTDVAPVLVFFHGGSFTHSSADSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALK WVKSRVWLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATNEGVKVLGNILLHPMFGGLERTQSEKRLDGKYFVTIHDRDWYWRAYLPEGEDRDHPACNPFG PRGQSLEGVKFPKSLVVVAGLDLVQDWQLAYVDGLKRTGHHVNLLYLKQATIGFYFLPNNDHFHCLMDELT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 359 Download |
| MAGGNEVNLN ECKRIVPLNT WVPISNFKLP YTLLRRPDGS FNRDLAEFLD RKVPANSFPV 60 DGVFSFDHVD TSTNLLTRIY LPAPLDPSRH GSVDLTEPLS TTDVAPVLVF FHGGSFTHSS 120 ADSAIYDTFC RRLVTICGVV VVSVDYRRSP EHRYPCAYDD GWNALKWVKS RVWLQSGKDS 180 NVYVYLAGDS SGGNIAHNVA VRATNEGVKV LGNILLHPMF GGLERTQSEK RLDGKYFVTI 240 HDRDWYWRAY LPEGEDRDHP ACNPFGPRGQ SLEGVKFPKS LVVVAGLDLV QDWQLAYVDG 300 LKRTGHHVNL LYLKQATIGF YFLPNNDHFH CLMDELTKFV HSIDEDSQSK SSPVLLTP* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00135 | COesterase | 0.0005 | 97 | 147 | 54 | + Carboxylesterase family. | ||
| COG2272 | PnbA | 2.0e-7 | 82 | 196 | 141 | + Carboxylesterase type B [Lipid metabolism] | ||
| PRK10162 | PRK10162 | 2.0e-12 | 87 | 266 | 188 | + acetyl esterase; Provisional | ||
| COG0657 | Aes | 7.0e-35 | 14 | 324 | 313 | + Esterase/lipase [Lipid metabolism] | ||
| pfam07859 | Abhydrolase_3 | 5.0e-71 | 108 | 322 | 216 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABG89394.1 | 0 | 1 | 341 | 1 | 341 | gibberellic acid receptor [Gossypium hirsutum] |
| GenBank | ABQ96123.1 | 0 | 1 | 342 | 1 | 342 | gibberellic acid receptor-b [Gossypium hirsutum] |
| GenBank | ACN86356.1 | 0 | 1 | 341 | 1 | 341 | GID1-1 [Gossypium hirsutum] |
| RefSeq | NP_191860.1 | 0 | 1 | 358 | 1 | 358 | GID1B (GA INSENSITIVE DWARF1B); hydrolase [Arabidopsis thaliana] |
| RefSeq | XP_002302813.1 | 0 | 1 | 342 | 1 | 342 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2zsi_A | 0 | 1 | 342 | 8 | 350 | E Chain E, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto |
| PDB | 2zsh_A | 0 | 1 | 342 | 8 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_F | 0 | 2 | 342 | 1 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_E | 0 | 2 | 342 | 1 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_D | 0 | 2 | 342 | 1 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
| isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| ES913054 | 282 | 4 | 285 | 0 |
| DT574934 | 321 | 19 | 339 | 0 |
| HO779605 | 342 | 1 | 342 | 0 |
| ES790010 | 343 | 1 | 342 | 0 |
| HO795605 | 340 | 2 | 340 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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