| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra007838 |
| Family | GT2 |
| Protein Properties | Length: 661 Molecular Weight: 75798.8 Isoelectric Point: 8.3409 |
| Chromosome | Chromosome/Scaffold: 09 Start: 31192734 End: 31195293 |
| Description | Glycosyl transferase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT2 | 203 | 379 | 1.4e-27 |
| VQIPMCNEREVYEQSISAVCQLDWPKDRMLIQVLDDSDDGSIQELIRAEVTKWSQKGVNIIYRHRLVRTGYKAGNLKSAMSCDYVEAYEFVAIFDADFQP NSDFLKLTVPHFKEKPELGLVQARWAFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEE | |||
| Full Sequence |
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| Protein Sequence Length: 661 Download |
| MENPNYSIVE VDEPESAFRP MERTRGKNAK QVTWVLLLQA HKAVGCLAWL ATAFWSLLGS 60 VKRRLCFTHR LGSERLGRDR WLFTAIKLFL AASLSVLVFE LIAYYKGWHY FKNIPTSKLE 120 IQSLFHLLYV GWLSLRADYI APPVKALSKL CIVLFLVQSV DRLILCLGCF WIKYKKIKPR 180 IDEEPFGNDD VEGSGSEYPM VLVQIPMCNE REVYEQSISA VCQLDWPKDR MLIQVLDDSD 240 DGSIQELIRA EVTKWSQKGV NIIYRHRLVR TGYKAGNLKS AMSCDYVEAY EFVAIFDADF 300 QPNSDFLKLT VPHFKEKPEL GLVQARWAFV NKDENLLTRL QNINLCFHFE VEQQVNGVFL 360 NFFGFNGTAG VWRIKALEES GGWLERTTVE DMDIAVRAHL HGWKFIYLND VKVLCEVPES 420 YEAYKKQQHR WHSGPMQLFR LCLGAILTSK IAMWKKANLI LLFFLLRKLI LPFYSFTLFC 480 VILPITMFVP EAELPVWVIC YVPIFMSLLN VLPAPKSFPF IVPYLLFENT MSVTKFNAMV 540 SGLFQLGSSY EWIVTKKAGR SSESDLLGLT DKRMPPNQMQ RGASESELLE ISQAEEQKKQ 600 TVPVKKTNKI FHKELALAFL LLTAAVRSLL ASQGVHFYFL LFQGLTFLLV GLDLIGEQMS 660 * 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd06423 | CESA_like | 1.0e-30 | 203 | 391 | 191 | + CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan. | ||
| TIGR03030 | CelA | 6.0e-31 | 196 | 441 | 265 | + cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils. | ||
| COG1215 | COG1215 | 8.0e-35 | 153 | 509 | 359 | + Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | ||
| cd06421 | CESA_CelA_like | 9.0e-52 | 199 | 439 | 244 | + CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end. | ||
| cd06437 | CESA_CaSu_A2 | 2.0e-108 | 199 | 435 | 238 | + Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants were significantly smaller, while the single mutant plants were almost normal. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF01495.1 | 0 | 1 | 660 | 25 | 690 | putative glucosyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_180039.1 | 0 | 1 | 660 | 25 | 690 | ATCSLC08; cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_194887.1 | 0 | 1 | 660 | 25 | 692 | ATCSLC5 (CELLULOSE-SYNTHASE LIKE C5); cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002308730.1 | 0 | 1 | 660 | 25 | 693 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002324379.1 | 0 | 1 | 660 | 25 | 692 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4hg6_A | 1e-24 | 197 | 481 | 138 | 443 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
