| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra007960 |
| Family | GT14 |
| Protein Properties | Length: 396 Molecular Weight: 44903.3 Isoelectric Point: 7.1005 |
| Chromosome | Chromosome/Scaffold: 02 Start: 12136673 End: 12138146 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 49 | 303 | 0 |
| FAYYITGGRGDGDRIFRLLLAVYHPRNRYLLHLGAEATDAERVALLSDLKSVPAVSAFGNVDVLGKVHRLSENGASKVADTLHAVSILLKLGRSWNWFIE LSALDYPLMTQDDLSHVFASVNRSVNFIDHTSDLAWKESQRIKPIVVDPALYLARRTQLFTATEKRPTPDAFKVFTGSPWIVLSRSFLEYSIFGWDNLPR ILLMYFNNVILSEECYFHTVICNAPEFINTTVNADLRYMIWDSPPKMEPHFLTTP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 396 Download |
| MGAEKKWLFT LFSVAFLSVF LLLLYSFSAF TSNPFPSPIR HGPHYPPSFA YYITGGRGDG 60 DRIFRLLLAV YHPRNRYLLH LGAEATDAER VALLSDLKSV PAVSAFGNVD VLGKVHRLSE 120 NGASKVADTL HAVSILLKLG RSWNWFIELS ALDYPLMTQD DLSHVFASVN RSVNFIDHTS 180 DLAWKESQRI KPIVVDPALY LARRTQLFTA TEKRPTPDAF KVFTGSPWIV LSRSFLEYSI 240 FGWDNLPRIL LMYFNNVILS EECYFHTVIC NAPEFINTTV NADLRYMIWD SPPKMEPHFL 300 TTPDFDQMAS SGAAFARQFK KDDPVLDKVD REILKRGRYR VTPGAWCASH SSWWTDPCSE 360 WDDVNVVKAG PQAKKLEETI TNFLDDLNSQ TNQCK* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 1.0e-69 | 49 | 309 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 8.0e-142 | 47 | 395 | 349 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_565009.1 | 0 | 1 | 395 | 1 | 395 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | XP_002284096.1 | 0 | 26 | 395 | 32 | 401 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311492.1 | 0 | 1 | 395 | 1 | 390 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002315896.1 | 0 | 1 | 395 | 1 | 400 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002531062.1 | 0 | 39 | 395 | 40 | 396 | acetylglucosaminyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.00000002 | 65 | 250 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.00000002 | 65 | 250 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.00000002 | 65 | 250 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.00000002 | 65 | 250 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.00000004 | 65 | 250 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
