| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra007983 |
| Family | GH9 |
| Protein Properties | Length: 484 Molecular Weight: 53044.5 Isoelectric Point: 4.7222 |
| Chromosome | Chromosome/Scaffold: 02 Start: 12275325 End: 12277205 |
| Description | cellulase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 25 | 475 | 0 |
| YIEALSKSLLFFHGQRSGPLPTDQQFSWRASSGLSDGSSANVDLVGGYYTEGDNVKHNFPMAFTTTMLSWSTLEYGEQMGTELQNALVNIRWATDYLLKC ATATPEKLYVGVGDPNADHKCWERPEDMDTPRTVYSVSPSNPGSDVAAETAAALAAASMVFKEVDSAYSLLLLATAKNVMQFAIKYRGSYSDSLSSSVCP FYCSYSGYKDELMWGAAWLLKATDDSYYKNFIQSLGGGDQPDIFNWDNKYAGAYVLLSQRALVNNDNTFEQYKLEAESFICKILPNTPSSSTSYTPGGLM YNYKLPQSNLQHVTAITFLLTTYAKYMKATQHTFNCGNSVTIVPDTLISLSKQEVDYILGENPAKMSYMVGYGTSFPMRIHHRGSSIPSQPHFSCADGLQ FLNTSNPNPNILTGAIVGGPNEKDAYADNREDFIQSEPTTYINAPFVGPLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 484 Download |
| MTSLFFLVFL FSSLLTPNVD ASPIYIEALS KSLLFFHGQR SGPLPTDQQF SWRASSGLSD 60 GSSANVDLVG GYYTEGDNVK HNFPMAFTTT MLSWSTLEYG EQMGTELQNA LVNIRWATDY 120 LLKCATATPE KLYVGVGDPN ADHKCWERPE DMDTPRTVYS VSPSNPGSDV AAETAAALAA 180 ASMVFKEVDS AYSLLLLATA KNVMQFAIKY RGSYSDSLSS SVCPFYCSYS GYKDELMWGA 240 AWLLKATDDS YYKNFIQSLG GGDQPDIFNW DNKYAGAYVL LSQRALVNND NTFEQYKLEA 300 ESFICKILPN TPSSSTSYTP GGLMYNYKLP QSNLQHVTAI TFLLTTYAKY MKATQHTFNC 360 GNSVTIVPDT LISLSKQEVD YILGENPAKM SYMVGYGTSF PMRIHHRGSS IPSQPHFSCA 420 DGLQFLNTSN PNPNILTGAI VGGPNEKDAY ADNREDFIQS EPTTYINAPF VGPLAYFASG 480 GSA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00759 | Glyco_hydro_9 | 7.0e-176 | 25 | 475 | 461 | + Glycosyl hydrolase family 9. | ||
| PLN02175 | PLN02175 | 0 | 18 | 482 | 469 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 21 | 478 | 466 | + endoglucanase | ||
| PLN02308 | PLN02308 | 0 | 25 | 479 | 463 | + endoglucanase | ||
| PLN03009 | PLN03009 | 0 | 25 | 479 | 466 | + cellulase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM63253.1 | 0 | 1 | 482 | 1 | 483 | putative beta-glucanase [Arabidopsis thaliana] |
| GenBank | AAT75042.1 | 0 | 19 | 479 | 21 | 483 | Cel9B [Populus tremula x Populus tremuloides] |
| EMBL | CBI17038.1 | 0 | 23 | 478 | 32 | 489 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_173701.1 | 0 | 1 | 482 | 1 | 483 | CEL5 (CELLULASE 5); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_177294.1 | 0 | 1 | 482 | 1 | 483 | ATCEL3 (ARABIDOPSIS THALIANA CELLULASE 3); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 25 | 475 | 5 | 426 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 1ksc_A | 0 | 25 | 475 | 5 | 426 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 1ks8_A | 0 | 25 | 475 | 5 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 25 | 475 | 6 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 25 | 475 | 6 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
