y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra008230 |
Family | GH1 |
Protein Properties | Length: 551 Molecular Weight: 63919.3 Isoelectric Point: 5.9428 |
Chromosome | Chromosome/Scaffold: 02 Start: 13968967 End: 13971948 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 39 | 526 | 0 |
RANFPEGFIFGTSTAAFQVEGAVHEGCRGPSMWDTYTKKFPHRNNYHKADVAVDFYHRYKEDIKLMKDLNTDGFRFSIAWPRIFPHGRMEKGISKAGVQF YHDLIDELLKNEITPLVTVFHWDTPQDLEDEYGGFLSDRIIKDYTEYANFTFQEYGHKVKHWITFNEPWVFSRAGYDIGKTAPGRCSKYIKEHGDLCHDG RSGHEAYIVSHNMLLAHADAVEAFRKCDKCKAGKIGIAHTPAWFDQNELTDEPHKLSEEEHATPATNLIDFVLGWHLNPTTYGDYPQSMKDHVGDRLPEF TEAQKNKLKNSADFVGINYYYSLFALHGEEQDPSKPSWQSDSLIDYEPRYVDRFNAFTIKPDVAKVDVYSNGLRRLLNYIKDKYGNPEVIITGNGYGEDL GEQDRSLVLALSDHHRTYYIQKHLLSLHQAICEDKVNVTGYFLWSLMDNFEWQEGYSARFGLYYVDYKNNLTRHEKLSAQWYSSFLQD |
Full Sequence |
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Protein Sequence Length: 551 Download |
MERFHKFPLL GLVLFLGFIG SPTKAIVHAC SSTELTFSRA NFPEGFIFGT STAAFQVEGA 60 VHEGCRGPSM WDTYTKKFPH RNNYHKADVA VDFYHRYKED IKLMKDLNTD GFRFSIAWPR 120 IFPHGRMEKG ISKAGVQFYH DLIDELLKNE ITPLVTVFHW DTPQDLEDEY GGFLSDRIIK 180 DYTEYANFTF QEYGHKVKHW ITFNEPWVFS RAGYDIGKTA PGRCSKYIKE HGDLCHDGRS 240 GHEAYIVSHN MLLAHADAVE AFRKCDKCKA GKIGIAHTPA WFDQNELTDE PHKLSEEEHA 300 TPATNLIDFV LGWHLNPTTY GDYPQSMKDH VGDRLPEFTE AQKNKLKNSA DFVGINYYYS 360 LFALHGEEQD PSKPSWQSDS LIDYEPRYVD RFNAFTIKPD VAKVDVYSNG LRRLLNYIKD 420 KYGNPEVIIT GNGYGEDLGE QDRSLVLALS DHHRTYYIQK HLLSLHQAIC EDKVNVTGYF 480 LWSLMDNFEW QEGYSARFGL YYVDYKNNLT RHEKLSAQWY SSFLQDGKEF EFDQHDEYHE 540 HDEYHEHDEL * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02998 | PLN02998 | 2.0e-111 | 33 | 525 | 497 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 4.0e-115 | 30 | 525 | 498 | + beta-glucosidase | ||
COG2723 | BglB | 4.0e-125 | 41 | 520 | 492 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 2.0e-135 | 43 | 520 | 485 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 4.0e-160 | 38 | 523 | 488 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC39504.1 | 0 | 1 | 529 | 1 | 522 | ATA27 [Arabidopsis thaliana] |
GenBank | AAF26759.2 | 0 | 1 | 529 | 348 | 869 | AC007396_8 T4O12.15 [Arabidopsis thaliana] |
GenBank | AAL67131.1 | 0 | 35 | 529 | 1 | 488 | putative beta-glucosidase [Arabidopsis thaliana] |
RefSeq | NP_177722.1 | 0 | 1 | 529 | 1 | 522 | ATA27; catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_188774.2 | 0 | 6 | 527 | 2 | 514 | BGLU19 (BETA GLUCOSIDASE 19); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1cbg_A | 0 | 37 | 525 | 14 | 489 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptq_B | 0 | 31 | 524 | 23 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptq_A | 0 | 31 | 524 | 23 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptm_B | 0 | 31 | 524 | 23 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptm_A | 0 | 31 | 524 | 23 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |