| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra008306 |
| Family | GH35 |
| Protein Properties | Length: 159 Molecular Weight: 18262.2 Isoelectric Point: 9.6928 |
| Chromosome | Chromosome/Scaffold: 02 Start: 14609197 End: 14610034 |
| Description | beta-galactosidase 16 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 32 | 152 | 1.4013e-45 |
| LVIDDQHKILFSSSIHYPCRKAKSGGIYVIDTYVFWNIHEPQQGKFDFSGRRDIVRFIKIIQAHGLYVCLRIGPFIQGEWSYVGLPFWLHNVPGNVFRTD NEPFKYHMKRYAQMIVKLMKS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 159 Download |
| MATFRSSLAL FILMAIIGAG DTGNVTYDGR SLVIDDQHKI LFSSSIHYPC RKAKSGGIYV 60 IDTYVFWNIH EPQQGKFDFS GRRDIVRFIK IIQAHGLYVC LRIGPFIQGE WSYVGLPFWL 120 HNVPGNVFRT DNEPFKYHMK RYAQMIVKLM KSENLYAF* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 3.0e-5 | 51 | 102 | 53 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 7.0e-13 | 25 | 131 | 119 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN03059 | PLN03059 | 4.0e-52 | 4 | 156 | 170 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 4.0e-59 | 31 | 151 | 131 | + Glycosyl hydrolases family 35. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG29193.1 | 0 | 14 | 157 | 1 | 154 | AC078898_3 beta-galactosidase, putative [Arabidopsis thaliana] |
| GenBank | AAG51670.1 | 0 | 1 | 157 | 1 | 167 | AC010704_14 putative beta-galactosidase, 3' partial; 3669-1 [Arabidopsis thaliana] |
| DDBJ | BAC43014.1 | 0 | 1 | 157 | 1 | 167 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_177866.2 | 0 | 1 | 157 | 1 | 167 | BGAL16 (beta-galactosidase 16); beta-galactosidase/ catalytic/ cation binding / sugar binding [Arabidopsis thaliana] |
| RefSeq | XP_002302225.1 | 0 | 24 | 157 | 7 | 150 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 3e-19 | 31 | 120 | 14 | 113 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.000000000000002 | 28 | 120 | 13 | 108 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 0.000000000000002 | 28 | 120 | 13 | 108 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8c_B | 0.000000000000002 | 28 | 120 | 13 | 108 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
| PDB | 4e8c_A | 0.000000000000002 | 28 | 120 | 13 | 108 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
