| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra008336 |
| Family | GH17 |
| Protein Properties | Length: 349 Molecular Weight: 38642.3 Isoelectric Point: 9.68 |
| Chromosome | Chromosome/Scaffold: 02 Start: 14797248 End: 14798535 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 97 | 344 | 0 |
| PRPAAATNFVATWILPYKNDVAIKWITIGNEVFPGDIAPFVAAAIKNVNTALTNSGVSGIAVTTVVAMSALENSYPPSAASFLPDLTEIMTEISSILSQT NSPLMANIYPYFAYASDPKDISLDYAVFKSNTPVVIDGDLKYSNMFVAMVDGFNAALEKINARNVVVTVAESGWPTEGNPPYTSVDNARAYNLGLLTCGG ATRMRTPRRPETAVDVFLFEMFRENQKQGPVEESFGMFSPDMTPVYTL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 349 Download |
| MDSKPTGLVA VISMLFLFIQ IICPAGNERC RGHHRSLLRP QRQQPPIPGR YNSFIQEQQH 60 RRHPYVRALR RYARSSSRLR PLRRVRSTKR RDPIPSPRPA AATNFVATWI LPYKNDVAIK 120 WITIGNEVFP GDIAPFVAAA IKNVNTALTN SGVSGIAVTT VVAMSALENS YPPSAASFLP 180 DLTEIMTEIS SILSQTNSPL MANIYPYFAY ASDPKDISLD YAVFKSNTPV VIDGDLKYSN 240 MFVAMVDGFN AALEKINARN VVVTVAESGW PTEGNPPYTS VDNARAYNLG LLTCGGATRM 300 RTPRRPETAV DVFLFEMFRE NQKQGPVEES FGMFSPDMTP VYTLFCPA* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 2.0e-5 | 110 | 337 | 239 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-73 | 99 | 346 | 250 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABN05912.1 | 0 | 78 | 345 | 82 | 317 | Glycoside hydrolase, family 17 [Medicago truncatula] |
| GenBank | ABN05913.1 | 0 | 78 | 345 | 81 | 336 | Glycoside hydrolase, family 17 [Medicago truncatula] |
| RefSeq | NP_177901.1 | 0 | 102 | 345 | 92 | 333 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | NP_177902.1 | 0 | 1 | 346 | 1 | 343 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002306606.1 | 0 | 98 | 345 | 64 | 309 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 99 | 344 | 66 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 99 | 344 | 66 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 99 | 344 | 66 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 99 | 344 | 66 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 99 | 344 | 66 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
