| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra008483 |
| Family | GT64 |
| Protein Properties | Length: 342 Molecular Weight: 38668.3 Isoelectric Point: 7.0756 |
| Chromosome | Chromosome/Scaffold: 02 Start: 15907532 End: 15908557 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT64 | 55 | 320 | 0 |
| ITVLINGYSESRIPLLQSIVAAYSGSSIVSSILVLWGNPTTPAQLLDHLYHNLTRYSLGTASISLIQQPSSSLNARFLPRPSVDTRAVLICDDDVEVDKK SLEFAFSVWKSNPDRLVGMFVRSHGFDLQGKDWIYTVHPDKYSIVLTKFMMMKQDYLFEYSCNGGVEMEEMRGVVDTMRNCEDILMNFVAADKLRAGPVM VGAERVRDWGDARNDEEEQEQVENGVREAGLSSRRVEHRKRRGKCIREFHRVMGKMPLMYSYGKVV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 342 Download |
| MDQIGTSNAF FSIWFLLFLA LSVTPLVFSR TLSADPDPCD AMKLRDFQKL RSDQITVLIN 60 GYSESRIPLL QSIVAAYSGS SIVSSILVLW GNPTTPAQLL DHLYHNLTRY SLGTASISLI 120 QQPSSSLNAR FLPRPSVDTR AVLICDDDVE VDKKSLEFAF SVWKSNPDRL VGMFVRSHGF 180 DLQGKDWIYT VHPDKYSIVL TKFMMMKQDY LFEYSCNGGV EMEEMRGVVD TMRNCEDILM 240 NFVAADKLRA GPVMVGAERV RDWGDARNDE EEQEQVENGV REAGLSSRRV EHRKRRGKCI 300 REFHRVMGKM PLMYSYGKVV NSVGEQGLCR KSGKLVFCDR D* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam09258 | Glyco_transf_64 | 9.0e-78 | 55 | 320 | 268 | + Glycosyl transferase family 64 domain. Members of this family catalyze the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analog of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0031227 | intrinsic to endoplasmic reticulum membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM61012.1 | 0 | 4 | 341 | 1 | 329 | unknown [Arabidopsis thaliana] |
| EMBL | CAN68561.1 | 0 | 30 | 340 | 22 | 326 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_001077854.1 | 0 | 4 | 341 | 9 | 337 | glycosyltransferase family protein 47 [Arabidopsis thaliana] |
| RefSeq | NP_565236.1 | 0 | 4 | 341 | 1 | 329 | glycosyltransferase family protein 47 [Arabidopsis thaliana] |
| RefSeq | XP_002523753.1 | 0 | 30 | 340 | 34 | 347 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1on8_B | 3e-19 | 53 | 315 | 28 | 275 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 1on8_A | 3e-19 | 53 | 315 | 28 | 275 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 1on6_B | 3e-19 | 53 | 315 | 28 | 275 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 1on6_A | 3e-19 | 53 | 315 | 28 | 275 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 1omz_B | 3e-19 | 53 | 315 | 28 | 275 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
