| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra008616 |
| Family | GT75 |
| Protein Properties | Length: 349 Molecular Weight: 38387.9 Isoelectric Point: 4.6765 |
| Chromosome | Chromosome/Scaffold: 10 Start: 13106396 End: 13107442 |
| Description | Alpha-1,4-glucan-protein synthase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT75 | 6 | 346 | 0 |
| INKNEVDIVIGALNADLTQFLNSWRPFFSGFHLIIVKDPELKDDLNIPEGFDVDVYSKPDIEKVVGAANAAMFSGYSCRYFGYLVSKKKYIVSIDDDCVP AKDPKGVLVDAVSQHVSNLENPATPLFFNTLYDPYCEGADFVRGYPFSLRSGVPCAASCGLWLNLADLDAPTQALKTEQRNTSYVDAVMTVPLKAMLPIS GINIAFNRELVGPALVPALRIAGEGKVRWETLEDVWCGMCLKHISDHLGYGVKTGLPYVWRNERGDAVESLRKKWEGMKLMEKSVPFFEALKLPESAVNV EDCVVELAKAVKEQLGSDDPAFTQAADAMVKWVQLWNSVNS | |||
| Full Sequence |
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| Protein Sequence Length: 349 Download |
| MSSSEINKNE VDIVIGALNA DLTQFLNSWR PFFSGFHLII VKDPELKDDL NIPEGFDVDV 60 YSKPDIEKVV GAANAAMFSG YSCRYFGYLV SKKKYIVSID DDCVPAKDPK GVLVDAVSQH 120 VSNLENPATP LFFNTLYDPY CEGADFVRGY PFSLRSGVPC AASCGLWLNL ADLDAPTQAL 180 KTEQRNTSYV DAVMTVPLKA MLPISGINIA FNRELVGPAL VPALRIAGEG KVRWETLEDV 240 WCGMCLKHIS DHLGYGVKTG LPYVWRNERG DAVESLRKKW EGMKLMEKSV PFFEALKLPE 300 SAVNVEDCVV ELAKAVKEQL GSDDPAFTQA ADAMVKWVQL WNSVNSSG* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03214 | RGP | 0 | 3 | 347 | 345 | + Reversibly glycosylated polypeptide. | ||
| PLN03180 | PLN03180 | 0 | 1 | 347 | 348 | + reversibly glycosylated polypeptide; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0007047 | : GO:0044234 |
| GO:0008466 | glycogenin glucosyltransferase activity |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030054 | cell junction |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD28560.1 | 0 | 1 | 347 | 1 | 347 | Alpha-1,4-glucan-protein synthase (UDP-forming) [Medicago truncatula] |
| RefSeq | NP_197155.1 | 0 | 1 | 348 | 1 | 348 | reversibly glycosylated polypeptide, putative [Arabidopsis thaliana] |
| RefSeq | XP_002325896.1 | 0 | 1 | 346 | 1 | 346 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002332719.1 | 0 | 1 | 346 | 1 | 346 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512611.1 | 0 | 1 | 346 | 1 | 346 | Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FY451572 | 264 | 42 | 305 | 0 |
| FY442484 | 258 | 92 | 349 | 0 |
| EV185177 | 250 | 1 | 250 | 0 |
| FY428111 | 245 | 5 | 249 | 0 |
| DK492855 | 243 | 1 | 243 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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