y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra008864 |
Family | GT48 |
Protein Properties | Length: 1931 Molecular Weight: 222857 Isoelectric Point: 9.1693 |
Chromosome | Chromosome/Scaffold: 10 Start: 14184475 End: 14194438 |
Description | glucan synthase-like 12 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT48 | 1032 | 1785 | 0 |
VPSNLEARRRISFFSNSLFMDMPAAPKVRNMLSFSVLTPYYTEEVLFSMHDLDTPNEDGVSILFYLQKIFPDEWNNFLERVKCYSEEEIKESVDLEEELR LWASYRGQTLTRTVRGMMYYRKALELQAFLDMAMHEDLMEGYKAVELNSEDTSRGERSLWAQCQAVADMKFTYVVSCQQYGIHKRSGDQRAQDILRLMTR YPSLRVAYIDEVEETVKDTSKKGNQKVYYSVLVKVPKSTDHSSLAQNLDQVIYRIKLPGPAILGEGKPENQNHAIIFSRGEGLQTIDMNQDNYMEEALKM RNLLQEFLTKHDGVRHPSILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRLLANPLRVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNST LREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDIYRLGHRFDFFRMMSCYFTTVGFYFSTLITVLTVYIFLYGRLYLVLSGLEQGLSTQ KGIRDNTPLQIALASLSFVQIGFLMALPMLMEIGLERGFRTALSEFVLMQLQLAPVFFTFSLGTKTHYYGRTLLHGGAKYRSTGRGFVVFHAKFADNYRL YSRSHFVKGLEMMLLLVVYQIFGSAYRGVLAYLLITISMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWNKWINNIGGIGVPAEKSWESWWEEEQEHLR HSGKRGIVVEILLSLRFFIYQYGLVYHLTITERTKNFLVYGVSWLVIFLILFVM |
Full Sequence |
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Protein Sequence Length: 1931 Download |
MSASRGGGPD QGPSQPQQRR IMRTQTVGNL GESFDSEVVP SSLVEIAPIL RVANEVVGSM 60 RSRKLTGWIP PPVEEEHDPT LMGRVKKSDA REMQSFYQHY YKKYIQALQN AADKADRAQL 120 TKAYQTANVL FEVLKAVNLT QSIEVDREIL EAQDKVAEKT QLYVHYNILP LDPDSANQAI 180 MRYPEIQAAV LGLRNTRGLP WPEGHKKKKD EDMLDWLQEM FGFQKDNVAN QREHLILLLA 240 NVHIRQFPKP DQQPKLDDQA LTDVMKKLFK NYKKWCKYLG RKSSLWLPTI QQEMQQRKLL 300 YMALYLLIWG EAANLRFMPE CLCYIYHHMA FELYGMLAGN VSPMTGENVK PAYGGEEDAF 360 LRKVVTPIYE VIAMEAQRSK KGKSKHSQWR NYDDLNEYFW SVDCFRLGWP MRADADFFYP 420 PVEETNIEKD GDNSKPAVAR DRWVGKVNFV EIRSFWHVFR SFDRMWSFYI LCLQAMIIMA 480 WDGGEPSSVF DAGVFKKVLS VFITAAIMKL GQATLDVILN FKAHRSMSLH VKLRYILKVI 540 SAAAWVIILP VTYAYSWKDP PAFARTIKSW FGSAMHSPSL FIIAVVFYLA PNMLAAVLFM 600 FPMLRRFLER ANFRIVMLMM WWSQPRLYVG RGMHEGAFAL LKYTMFWVSL IATKLAFSYY 660 IEIKPLVAPT QAIMRARVTN FQWHEFFPRA KNNIGVVIAL WAPIILVYFM DSQIWYAIYS 720 TIFGGIYGAF RRLGEIRTLG MLRSRFESLP GAFNDRLIPD GNQQRKKGLR ATLSHNFTED 780 KVPVNKEKEA ARFAQLWNTI ISSFREEDLI SDREMDLLLV PYWADRDLDL IQWPPFLLAS 840 KIPIALDMAK DSNGKDRELM KRIESDSYMK CAVRECYASF KNIINFLVQG NREKEVIEII 900 FSEVDKHIDT GALIQEYRMS ALPSLYDHFV KLIKYLLDNN VEDRDHVVIL FQDMLEVVTR 960 DIMMEDYNIS SLVDSSQGGA WHGGMVPLEQ QYQLFASSGA IRFPIEPVTE AWKEKIKRLH 1020 LLLTTKESAM DVPSNLEARR RISFFSNSLF MDMPAAPKVR NMLSFSVLTP YYTEEVLFSM 1080 HDLDTPNEDG VSILFYLQKI FPDEWNNFLE RVKCYSEEEI KESVDLEEEL RLWASYRGQT 1140 LTRTVRGMMY YRKALELQAF LDMAMHEDLM EGYKAVELNS EDTSRGERSL WAQCQAVADM 1200 KFTYVVSCQQ YGIHKRSGDQ RAQDILRLMT RYPSLRVAYI DEVEETVKDT SKKGNQKVYY 1260 SVLVKVPKST DHSSLAQNLD QVIYRIKLPG PAILGEGKPE NQNHAIIFSR GEGLQTIDMN 1320 QDNYMEEALK MRNLLQEFLT KHDGVRHPSI LGLREHIFTG SVSSLAWFMS NQETSFVTIG 1380 QRLLANPLRV RFHYGHPDVF DRLFHLTRGG VSKASKVINL SEDIFAGFNS TLREGNVTHH 1440 EYIQVGKGRD VGLNQISMFE AKIANGNGEQ TLSRDIYRLG HRFDFFRMMS CYFTTVGFYF 1500 STLITVLTVY IFLYGRLYLV LSGLEQGLST QKGIRDNTPL QIALASLSFV QIGFLMALPM 1560 LMEIGLERGF RTALSEFVLM QLQLAPVFFT FSLGTKTHYY GRTLLHGGAK YRSTGRGFVV 1620 FHAKFADNYR LYSRSHFVKG LEMMLLLVVY QIFGSAYRGV LAYLLITISM WFMVGTWLFA 1680 PFLFNPSGFE WQKIVDDWTD WNKWINNIGG IGVPAEKSWE SWWEEEQEHL RHSGKRGIVV 1740 EILLSLRFFI YQYGLVYHLT ITERTKNFLV YGVSWLVIFL ILFVMKTISV GRRKFSASFQ 1800 LMFRLIKGLI FMTFIAIIVI LITLAHMTIQ DIIVCILAFM PTGWGMLLIA QACKPVVHRA 1860 GFWGSVRTLA RGYEIGMGLL LFTPVAFLAW FPFVSEFQTR MLFNQAFSRG LQISRILGGH 1920 RKDRSSRNKE * 1980 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam14288 | FKS1_dom1 | 6.0e-58 | 296 | 412 | 118 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
pfam02364 | Glucan_synthase | 0 | 1032 | 1782 | 835 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
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GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI16456.1 | 0 | 3 | 1930 | 2 | 1948 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001154712.1 | 0 | 1 | 1930 | 1 | 1981 | ATGSL12 (glucan synthase-like 12); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | NP_196804.5 | 0 | 1 | 1930 | 1 | 1999 | ATGSL12 (glucan synthase-like 12); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
Swiss-Prot | Q9LXT9 | 0 | 1 | 1930 | 1 | 1964 | CALS3_ARATH RecName: Full=Callose synthase 3; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 12 |
RefSeq | XP_002528124.1 | 0 | 1 | 1930 | 1 | 1955 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |