| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra009023 |
| Family | GH3 |
| Protein Properties | Length: 793 Molecular Weight: 86391 Isoelectric Point: 5.7723 |
| Chromosome | Chromosome/Scaffold: 10 Start: 14898663 End: 14901718 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 72 | 340 | 0 |
| SLPRLGIPPYEWWSESLHGLADNGPGVSFNGSIASATSFPQVIVSAAAFNRTLWRGIGSAVAVEGRAMYNGGQAGLTYWAPNINVFRDPRWGRGQETPGE DPKVVSEYGVEFVRGFQEVKKTNVLKSSLGDGGHDDDDGDGDGDGKLMLSACCKHFTAYDLEKWGNFTRYDFNAVVTEQDMEDTYQPPFQSCIEDGKASC LMCSYNAVNGVPACARQDLLQKARVDWGFKGYITSDCDAVATIFDYQGYTNSAEEAVADAIKAGVDINC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 793 Download |
| MNLQLTLTSL LFFTSAIAET FDSNPKFPCQ PPHHSSYPFC NISLSTTKRA HSLVSLLTLP 60 EKIGQLSNTA ASLPRLGIPP YEWWSESLHG LADNGPGVSF NGSIASATSF PQVIVSAAAF 120 NRTLWRGIGS AVAVEGRAMY NGGQAGLTYW APNINVFRDP RWGRGQETPG EDPKVVSEYG 180 VEFVRGFQEV KKTNVLKSSL GDGGHDDDDG DGDGDGKLML SACCKHFTAY DLEKWGNFTR 240 YDFNAVVTEQ DMEDTYQPPF QSCIEDGKAS CLMCSYNAVN GVPACARQDL LQKARVDWGF 300 KGYITSDCDA VATIFDYQGY TNSAEEAVAD AIKAGVDINC GTYMVRHTQA AIDKGKVSEE 360 QIDRALLNLF AVQLRLGLFD GNPKQGRYAK LGANDICSSS HRELALEAAR QGIVLLKNDH 420 KLLPLKKSHV SSLAIIGPMA NNISSMGGTY TGKPCQRKTL FTELLEYVKK TSYASGCSDV 480 ACDSPAAFKE AVAVAKGADF VIIVAGLDLT QETEDKDRVS LSLPGKQRDL VTSIAAASKK 540 PVILVLTGGG PVDVTFAKTD PRIGSIVWIG YPGETGGRAL AEILFGDFNP GGRLPMTWYP 600 QSFSEVAMSD MHMRADLARG YPGRTYRFYT GPEVYKFGTG LSYTEFDYEI LSAPTRLGLS 660 EVIPQDSSHK KLLLQKGEGE LRYLQLDDLA VDSCESLKFS VRFSVRNTGE MDGSHVLMLY 720 SRMPRVLSGV PERQLIGFER VHVRSSEMVE AEFVIDPCKQ LSVANDVGKR VIPLGVHDLV 780 LGDLQHSLSL EF* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 1.0e-55 | 74 | 451 | 384 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam01915 | Glyco_hydro_3_C | 5.0e-58 | 413 | 644 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| pfam00933 | Glyco_hydro_3 | 1.0e-58 | 50 | 365 | 324 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 3.0e-81 | 58 | 757 | 749 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 1 | 792 | 796 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC41913.1 | 0 | 59 | 792 | 2 | 732 | putative beta-xylosidase [Arabidopsis thaliana] |
| EMBL | CBI25718.1 | 0 | 23 | 792 | 26 | 768 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_196618.1 | 0 | 1 | 792 | 1 | 792 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| RefSeq | XP_002264031.1 | 0 | 23 | 792 | 26 | 789 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299457.1 | 0 | 23 | 792 | 26 | 779 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 150 | 757 | 128 | 698 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 3u48_A | 0 | 150 | 757 | 128 | 698 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 3u4a_B | 0 | 150 | 757 | 128 | 698 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 3u4a_A | 0 | 150 | 757 | 128 | 698 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 2x41_A | 2e-38 | 48 | 791 | 2 | 708 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
