| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra009290 |
| Family | AA1 |
| Protein Properties | Length: 483 Molecular Weight: 53334.3 Isoelectric Point: 6.5679 |
| Chromosome | Chromosome/Scaffold: 10 Start: 16015338 End: 16016864 |
| Description | laccase 13 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 1 | 465 | 0 |
| MRNPWADGPEYITQCPIKPGGSYTYRFNIEEQEGTLWWHAHSRWLRATVYGALIIRPPLSSPHYPFPVLPKREFTLLLGEWWDRNPMDVLNMAQFTGAAP NVSDAFTINGQPGDFYRCSSQETLRFLVGSGETVLLRVINSGLNQELFFGVANHKLTVVAADASYTKPFSTNVIMLGPGQTTDVLLTADQPPAHYYMAAH AYNSANAPFDNTTTTSILEYKDAPCVTSQSQARAIPAQLPGFNDTATAAAFTAQMKSPSKVEVPLEVDEDLFFTVGLGLFNCPTPNTQRCQGPNGTRFTA SINNVSFVFPRQNSILQAYYQGTPAGVFTTDFPPVPPTTFDYTGNVSRGLWQPTRGTKAYKLKYKSKVQVILQDTSIVTIENHPMHLHGYEFYVVGTGIG NFNANKDTSSFNLIDPPRRNTIGTPPGGWIAIRFVADNPGVWLMHCHIDAHIFWGLAMVFLVENG | |||
| Full Sequence |
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| Protein Sequence Length: 483 Download |
| MRNPWADGPE YITQCPIKPG GSYTYRFNIE EQEGTLWWHA HSRWLRATVY GALIIRPPLS 60 SPHYPFPVLP KREFTLLLGE WWDRNPMDVL NMAQFTGAAP NVSDAFTING QPGDFYRCSS 120 QETLRFLVGS GETVLLRVIN SGLNQELFFG VANHKLTVVA ADASYTKPFS TNVIMLGPGQ 180 TTDVLLTADQ PPAHYYMAAH AYNSANAPFD NTTTTSILEY KDAPCVTSQS QARAIPAQLP 240 GFNDTATAAA FTAQMKSPSK VEVPLEVDED LFFTVGLGLF NCPTPNTQRC QGPNGTRFTA 300 SINNVSFVFP RQNSILQAYY QGTPAGVFTT DFPPVPPTTF DYTGNVSRGL WQPTRGTKAY 360 KLKYKSKVQV ILQDTSIVTI ENHPMHLHGY EFYVVGTGIG NFNANKDTSS FNLIDPPRRN 420 TIGTPPGGWI AIRFVADNPG VWLMHCHIDA HIFWGLAMVF LVENGEGHLQ SVQSPPLDLP 480 QC* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07731 | Cu-oxidase_2 | 6.0e-40 | 343 | 466 | 124 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 6.0e-49 | 3 | 460 | 493 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 5.0e-50 | 4 | 460 | 496 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 6.0e-63 | 4 | 460 | 501 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 2 | 482 | 485 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_180580.1 | 0 | 1 | 482 | 90 | 570 | LAC3 (laccase 3); laccase [Arabidopsis thaliana] |
| RefSeq | NP_196330.3 | 0 | 1 | 482 | 86 | 569 | LAC13 (laccase 13); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002319955.1 | 0 | 1 | 482 | 97 | 576 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002326089.1 | 0 | 1 | 482 | 97 | 576 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516345.1 | 0 | 1 | 482 | 97 | 577 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 4 | 460 | 70 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1asq_A | 0 | 4 | 460 | 70 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1asp_B | 0 | 4 | 460 | 70 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1asp_A | 0 | 4 | 460 | 70 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1aso_B | 0 | 4 | 460 | 70 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO797675 | 487 | 1 | 483 | 0 |
| DY297248 | 321 | 128 | 445 | 0 |
| BX839990 | 224 | 1 | 224 | 0 |
| EX274037 | 311 | 157 | 464 | 0 |
| DV141384 | 252 | 34 | 282 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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