| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra009305 |
| Family | GT34 |
| Protein Properties | Length: 456 Molecular Weight: 51783.5 Isoelectric Point: 8.06 |
| Chromosome | Chromosome/Scaffold: 10 Start: 16072215 End: 16073582 |
| Description | Galactosyl transferase GMA12/MNN10 family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT34 | 146 | 386 | 0 |
| KPRVLLLTGSPPKPCDNPIGDHYLLKSVKNKIDYCRIHGIEIVYNMAHLDKELAGYWAKLPMLRRLMLSHPEIEWIWWMDSDALFTDMVFEVPLSRYENH NLVIHGYPDLLYDQKSWIALNTGSFLFRNCQWSLDLLDVWAPMGPKGPIREEAGKVLTAFLKGRPAFEADDQSALIYLLLSEKDTWMGKVFVENQYYLHG FWEGLVDRYEEMMDKYHPGLGDERWPFVTHFVGCKPCGSYA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 456 Download |
| MGKEDGFKTQ KRVSTSVSAG VLPTTIATPG GRKPPPRGKQ IKKTFNNLKM TILCGLVTIL 60 VLRGTIGVNF GTSEADAVNQ NLIEETNRLL AEIRSDSDPT DPNDPPDSDL DLNATYTLGP 120 KITNWDKQRA TWLTQNPNFP SSLAGKPRVL LLTGSPPKPC DNPIGDHYLL KSVKNKIDYC 180 RIHGIEIVYN MAHLDKELAG YWAKLPMLRR LMLSHPEIEW IWWMDSDALF TDMVFEVPLS 240 RYENHNLVIH GYPDLLYDQK SWIALNTGSF LFRNCQWSLD LLDVWAPMGP KGPIREEAGK 300 VLTAFLKGRP AFEADDQSAL IYLLLSEKDT WMGKVFVENQ YYLHGFWEGL VDRYEEMMDK 360 YHPGLGDERW PFVTHFVGCK PCGSYADYAV EHCLKSMERA YNFADNQVLK LYGFGHRGLL 420 SPKIKRIRNE TISPLKFVNR FDIRRAAPLK IEARS* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam05637 | Glyco_transf_34 | 9.0e-84 | 145 | 386 | 269 | + galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34. | ||
| PLN03181 | PLN03181 | 3.0e-138 | 115 | 437 | 359 | + glycosyltransferase; Provisional | ||
| PLN03182 | PLN03182 | 0 | 40 | 448 | 416 | + xyloglucan 6-xylosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016021 | integral to membrane |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAI11457.1 | 0 | 1 | 455 | 1 | 456 | putative glycosyltransferase [Solanum tuberosum] |
| RefSeq | NP_177578.1 | 0 | 40 | 446 | 42 | 449 | XXT5 (XYLOGLUCAN XYLOSYLTRANSFERASE 5); transferase/ transferase, transferring glycosyl groups / xyloglucan 6-xylosyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_196389.1 | 0 | 1 | 455 | 1 | 457 | galactosyl transferase GMA12/MNN10 family protein [Arabidopsis thaliana] |
| RefSeq | XP_002318600.1 | 0 | 37 | 455 | 4 | 420 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514720.1 | 0 | 9 | 447 | 7 | 449 | Xyloglucan 6-xylosyltransferase, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xyloglucan biosynthesis | RXN-12415 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
| xyloglucan biosynthesis | RXN-9461 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX126465 | 278 | 158 | 435 | 0 |
| EV241557 | 298 | 148 | 445 | 0 |
| DR931373 | 292 | 156 | 447 | 0 |
| DR944115 | 286 | 162 | 447 | 0 |
| DW002726 | 280 | 166 | 445 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
