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Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra009540 |
Family | AA1 |
Protein Properties | Length: 562 Molecular Weight: 62618.2 Isoelectric Point: 8.985 |
Chromosome | Chromosome/Scaffold: 10 Start: 17151820 End: 17154191 |
Description | laccase 11 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 27 | 553 | 0 |
AAVKKYQFDVQMKNVSRLCNAKPIVTVNGMFPGPTVYAREGDRVIINVTNHVQYNLSIHWHGLKQYRNGWADGPAYITQCPMQTGQSYVYDFNVTGQRGT LWWHAHILWLRATVYGAIVILPQPGKPYPFPQPYQETNIVLGEWWNGDVETAVNQANKLGAPPPMSDAHTINGKPGPLFPCSEKHTFVVEVEADKTYLLR IINAALNDELFFGIAGHDMTVVEIDAVYTKPFTTKFILLGPGQTTNVLVKTNQSPNRYFMAAGPFMDAPVTVDNKTVTAILQYKGVPNTIIPILPKLPSP NDTSYALDYNQKLRSLNTPNFPALVPLKVDRRLFYTIGLGINACPTCVNGTNLAASINNITFVMPKTALLKAHYFNIPNVFRTDFPDRPPKPFNYTGVPL TANLGTSTGTRLSRVKFNTTIELILQDTNLLTVESHPFHLHGYNFFVVGTGVGNFDPKKDPAKFNLIDPPERNTVGVPTGGWAAIRFRADNPGVWFMHCH LEVHTMWGLKMAFVVENGNTPELSVLP |
Full Sequence |
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Protein Sequence Length: 562 Download |
MKMIRYPSFL FLFLYLLGFL GQSPVDAAVK KYQFDVQMKN VSRLCNAKPI VTVNGMFPGP 60 TVYAREGDRV IINVTNHVQY NLSIHWHGLK QYRNGWADGP AYITQCPMQT GQSYVYDFNV 120 TGQRGTLWWH AHILWLRATV YGAIVILPQP GKPYPFPQPY QETNIVLGEW WNGDVETAVN 180 QANKLGAPPP MSDAHTINGK PGPLFPCSEK HTFVVEVEAD KTYLLRIINA ALNDELFFGI 240 AGHDMTVVEI DAVYTKPFTT KFILLGPGQT TNVLVKTNQS PNRYFMAAGP FMDAPVTVDN 300 KTVTAILQYK GVPNTIIPIL PKLPSPNDTS YALDYNQKLR SLNTPNFPAL VPLKVDRRLF 360 YTIGLGINAC PTCVNGTNLA ASINNITFVM PKTALLKAHY FNIPNVFRTD FPDRPPKPFN 420 YTGVPLTANL GTSTGTRLSR VKFNTTIELI LQDTNLLTVE SHPFHLHGYN FFVVGTGVGN 480 FDPKKDPAKF NLIDPPERNT VGVPTGGWAA IRFRADNPGV WFMHCHLEVH TMWGLKMAFV 540 VENGNTPELS VLPPPKDYPS C* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03390 | ascorbOXfungal | 8.0e-56 | 36 | 543 | 556 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
PLN02191 | PLN02191 | 5.0e-78 | 27 | 540 | 552 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 1.0e-86 | 25 | 544 | 558 | + oxidoreductase | ||
TIGR03388 | ascorbase | 5.0e-100 | 29 | 544 | 553 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 27 | 561 | 539 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB86093.1 | 0 | 9 | 561 | 3 | 555 | laccase precursor-like [Arabidopsis thaliana] |
EMBL | CBI32739.1 | 0 | 24 | 561 | 25 | 562 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_195946.2 | 0 | 1 | 561 | 1 | 557 | LAC11 (laccase 11); laccase [Arabidopsis thaliana] |
RefSeq | XP_002275392.1 | 0 | 12 | 561 | 6 | 557 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002519529.1 | 0 | 10 | 561 | 9 | 559 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 27 | 540 | 1 | 522 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1asq_A | 0 | 27 | 540 | 1 | 522 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1asp_B | 0 | 27 | 540 | 1 | 522 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1asp_A | 0 | 27 | 540 | 1 | 522 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1aso_B | 0 | 27 | 540 | 1 | 522 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |