CAZyme Information

Basic Information
SpeciesBrassica rapa
Cazyme IDBra009633
FamilyGT4
Protein PropertiesLength: 545 Molecular Weight: 60148.3 Isoelectric Point: 8.4511
ChromosomeChromosome/Scaffold: 10 Start: 17523960 End: 17526686
Descriptionsulfoquinovosyldiacylglycerol 2
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT43384838.7e-39
  EPEKPLVIHVGRIGVEKSLELLKSVMDKLPEARIAFIGDGPYREDLEKLFAGMPAVFTGMLQGEELSQAYASGDVFVMPSESETLGLVVLEAMASGLPVV
  AARAGGIPDIIPEDQEGKTGFLFSPGDVEDCVTKVRSLLNDSETRD
Full Sequence
Protein Sequence     Length: 545     Download
MNLSSSSSSL SITPPPFLPS TTKHTCFSSS SSATTRCSFV NSPVSIGVSS PRRLPISLVR    60
KQSKTFFGVV SASSGSRDMT SVTQASGDGD EAPLLDPESY SKPRRIALFV EPSPFFSIQT    120
CLCLLCVRRN VSVIQCWAFD AEIYYVSGYK NRFQNFIRYL REMGDEVIVV TTHEGVPQEF    180
YGAKVIGSRS FPCPWYQKVP LSLALSPRII SEIARFNPDI IHASSPGIMV FGALAIAKML    240
SVPIVMSYHT HVPVYIPRYT FSWLVQPMWS VIRFLHRAAD LTLVPSAAIG KDLIAAGATA    300
ANQLRLWNKG VDSESFNPCF RSQEMRIRLR QENMINGEPE KPLVIHVGRI GVEKSLELLK    360
SVMDKLPEAR IAFIGDGPYR EDLEKLFAGM PAVFTGMLQG EELSQAYASG DVFVMPSESE    420
TLGLVVLEAM ASGLPVVAAR AGGIPDIIPE DQEGKTGFLF SPGDVEDCVT KVRSLLNDSE    480
TRDIIGKAAR EETEKYDWRA ATTKIRNEQY SAAIWFWRKK KAQVLGPLNW LVKRLFPVPP    540
QVNA* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd03798GT1_wlbH_like1.0e-51147513387+
cd03801GT1_YqgM_like1.0e-68145506372+
TIGR00032argG9.0e-73154497357+
TIGR00009L286.0e-125146501359+
PLN02871PLN02871053540495+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAK76635.10815392430unknown protein [Arabidopsis thaliana]
EMBLCAB69850.1065395466putative protein [Arabidopsis thaliana]
RefSeqNP_568085.2065395506SQD2 (sulfoquinovosyldiacylglycerol 2); UDP-glycosyltransferase/ UDP-sulfoquinovose:DAG sulfoquinovosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana]
RefSeqXP_002309122.10765391432predicted protein [Populus trichocarpa]
RefSeqXP_002323560.10885399427predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2jjm_L5e-1615849138363A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_K5e-1615849138363A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_J5e-1615849138363A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_I5e-1615849138363A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_H5e-1615849138363A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EG4737153042255280
HO8131183241815040
DK493132319523700
DV7116653062115160
CO088719321874070
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_004_00305.1Aquca_053_00022.3Aquca_053_00022.2Aquca_053_00022.1
Arabidopsis lyrata860579323188
Arabidopsis thalianaAT5G01220.1AT3G45100.2AT3G45100.1
Brachypodium distachyonBradi1g59860.1Bradi2g02800.1Bradi1g67200.1Bradi1g32610.1
Brassica rapaBra005694Bra009589
Carica papayaevm.model.supercontig_163.3evm.model.supercontig_65.21
Capsella rubellaCarubv10000742mCarubv10019008m
Chlamydomonas reinhardtiiCre01.g038550.t1.3Cre16.g689150.t1.2Cre01.g006800.t1.3
Citrus clementinaCiclev10011473mCiclev10001141mCiclev10001076m
Citrus sinensisorange1.1g022615morange1.1g017114morange1.1g016648morange1.1g009759morange1.1g027511m
Cucumis sativusCucsa.176160.1Cucsa.143020.1
Eucalyptus grandisEucgr.A00516.1Eucgr.J00902.1
Fragaria vescamrna18817.1-v1.0-hybridmrna24819.1-v1.0-hybrid
Glycine maxGlyma03g14200.1Glyma01g27840.1Glyma18g42540.1Glyma07g17680.4Glyma07g17680.3
Glyma07g17680.2Glyma07g17680.1Glyma20g12140.9Glyma20g12140.8Glyma20g12140.7
Glyma20g12140.6Glyma20g12140.5Glyma20g12140.4Glyma20g12140.3Glyma20g12140.2
Glyma20g12140.10Glyma13g25060.1
Gossypium raimondiiGorai.012G112200.2Gorai.012G112200.1Gorai.002G261700.2Gorai.002G261700.6Gorai.002G261700.4
Gorai.002G261700.3Gorai.002G261700.1Gorai.003G143800.9Gorai.003G143800.8Gorai.003G143800.7
Gorai.003G143800.6Gorai.003G143800.5Gorai.003G143800.4Gorai.003G143800.3Gorai.003G143800.2
Gorai.003G143800.10Gorai.003G143800.1
Linum usitatissimumLus10004832Lus10002499Lus10024892Lus10022925
Malus domesticaMDP0000899469MDP0000143617MDP0000297386MDP0000273680MDP0000203472
MDP0000184748MDP0000198677
Manihot esculentacassava4.1_007989mcassava4.1_005643mcassava4.1_032287m
Medicago truncatulaMedtr4g015260.1Medtr7g067340.1
Mimulus guttatusmgv1a004620mmgv1a004551mmgv1a006150mmgv1a006148m
Oryza sativaLOC_Os01g04920.1LOC_Os07g01030.1LOC_Os03g15840.1LOC_Os07g16960.1
Panicum virgatumPavirv00011082mPavirv00023556mPavirv00064963mPavirv00000330mPavirv00022111m
Pavirv00063251mPavirv00030308mPavirv00006595mPavirv00056553mPavirv00006877m
Physcomitrella patensPp1s24_194V6.1Pp1s106_103V6.1
Phaseolus vulgarisPhvul.010G005100.1Phvul.008G106900.1Phvul.005G132400.1Phvul.002G226400.1
Picea abiesMA_158718g0080MA_60607g0010MA_159042g1330MA_159118g0680MA_159090g0090
MA_159042g1140
Populus trichocarpaPotri.016G112600.4Potri.016G112600.3Potri.016G112600.2Potri.016G112600.1Potri.006G097600.3
Potri.006G097600.2Potri.006G097600.1Potri.016G130000.1
Prunus persicappa004263mppa005676mppa018035m
Ricinus communis35899.m00002429969.m00027234675.m00002848584.m00001330418.m000015
32791.m00002229638.m00053127698.m000067
Setaria italicaSi020690mSi001496mSi035897mSi035683m
Selaginella moellendorffii170091406541
Sorghum bicolorSb02g000240.1Sb03g006480.1Sb01g040150.1Sb02g008800.1
Thellungiella halophilaThhalv10013276mThhalv10002532m
Vitis viniferaGSVIVT01033998001GSVIVT01024777001
Volvox carteriVocar20009459mVocar20001320m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)