| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra009970 |
| Family | CE10 |
| Protein Properties | Length: 346 Molecular Weight: 38503.7 Isoelectric Point: 6.942 |
| Chromosome | Chromosome/Scaffold: 06 Start: 18386952 End: 18388642 |
| Description | alpha/beta-Hydrolases superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE10 | 51 | 339 | 0 |
| RKVPANANPVNGVFSFDVIMDRQTNLLSRVYRPAYAGGDPPSFTDLQKPVDGEVVPVIVFFHGGSFVHSSANSAIYDTLCRRLVGLCGFVVVSVNYRRAP ENRYPCAYDDGWTALNWVNSRPWLQSKKDSKVHIFLAGDSSGGNIAHNVAVRAVESGIGVLGNILLNPMFGGTERTESETRLDGKYFVTVRDRDWYWRAF LPEGEDREHPACSPFGPKSKSLEGLSFPKSLVVVAGLDLIQDWQLKYAEGLKRAGQEVKLLYLDQATIGFYLLPNNNHFHTVMEEIAAF | |||
| Full Sequence |
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| Protein Sequence Length: 346 Download |
| MAGSDQVNLI ESKTVVPLNT WVLISNFKLA YNLLRRPDGT FNRHLAEFLD RKVPANANPV 60 NGVFSFDVIM DRQTNLLSRV YRPAYAGGDP PSFTDLQKPV DGEVVPVIVF FHGGSFVHSS 120 ANSAIYDTLC RRLVGLCGFV VVSVNYRRAP ENRYPCAYDD GWTALNWVNS RPWLQSKKDS 180 KVHIFLAGDS SGGNIAHNVA VRAVESGIGV LGNILLNPMF GGTERTESET RLDGKYFVTV 240 RDRDWYWRAF LPEGEDREHP ACSPFGPKSK SLEGLSFPKS LVVVAGLDLI QDWQLKYAEG 300 LKRAGQEVKL LYLDQATIGF YLLPNNNHFH TVMEEIAAFV NAECQ* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00135 | COesterase | 0.0002 | 106 | 147 | 45 | + Carboxylesterase family. | ||
| COG2272 | PnbA | 8.0e-6 | 99 | 147 | 49 | + Carboxylesterase type B [Lipid metabolism] | ||
| PRK10162 | PRK10162 | 1.0e-8 | 107 | 260 | 159 | + acetyl esterase; Provisional | ||
| COG0657 | Aes | 8.0e-38 | 79 | 343 | 268 | + Esterase/lipase [Lipid metabolism] | ||
| pfam07859 | Abhydrolase_3 | 2.0e-72 | 108 | 322 | 216 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2ZSH | 0 | 1 | 343 | 8 | 351 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| RefSeq | NP_187163.1 | 0 | 1 | 344 | 1 | 345 | GID1A (GA INSENSITIVE DWARF1A); hydrolase [Arabidopsis thaliana] |
| RefSeq | NP_198084.1 | 0 | 1 | 345 | 1 | 344 | GID1C (GA INSENSITIVE DWARF1C); hydrolase [Arabidopsis thaliana] |
| RefSeq | XP_002319576.1 | 0 | 1 | 344 | 1 | 344 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002328407.1 | 0 | 1 | 344 | 1 | 344 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2zsi_A | 0 | 1 | 343 | 8 | 351 | A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 |
| PDB | 2zsh_A | 0 | 1 | 343 | 8 | 351 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_F | 0 | 2 | 342 | 1 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_E | 0 | 2 | 342 | 1 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_D | 0 | 2 | 342 | 1 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
| isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO795605 | 343 | 2 | 344 | 0 |
| ES790010 | 340 | 1 | 340 | 0 |
| HO779605 | 345 | 1 | 344 | 0 |
| DT574934 | 322 | 19 | 339 | 0 |
| EV240117 | 306 | 39 | 344 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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