| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra010422 |
| Family | GT31 |
| Protein Properties | Length: 407 Molecular Weight: 45638.8 Isoelectric Point: 7.1313 |
| Chromosome | Chromosome/Scaffold: 08 Start: 14453217 End: 14455455 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 152 | 348 | 0 |
| KRRDSVRATWMPPGEDRKKLEEDKGIIMRFVIGHSATPGGILDRAIQAEESKHGDFLRLDHVEGYLELSAKTKSYFTTAYALWDADFYVKVDDDVHVNIA TLGAELARYRMKPRVYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYFRHATGQLYAISRELASYISINQNVLHKYVNEDVSLGSWFLGLDVEHVD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 407 Download |
| MSMKHHHRGG LELSASKSFV SKKLTFFLCI GFFCAGTLFS DRMWPEPEAN VVSREASDER 60 LHLVSDDCDS SKKSLKLESK DSLGEAYKSP DAIQTLDKTI STLEMELVAA RAAQESIMNG 120 SPVSDDFKLP ETATRRKYLM VVGVNTAFSS RKRRDSVRAT WMPPGEDRKK LEEDKGIIMR 180 FVIGHSATPG GILDRAIQAE ESKHGDFLRL DHVEGYLELS AKTKSYFTTA YALWDADFYV 240 KVDDDVHVNI ATLGAELARY RMKPRVYIGC MKSGPVLAQK GVRYHEPEYW KFGEEGNKYF 300 RHATGQLYAI SRELASYISI NQNVLHKYVN EDVSLGSWFL GLDVEHVDDR RLCCGTTDCE 360 WKAQAGNMCV ASFDWSCSGI CRSADRMKDV HRRCGEGPNA LLAASF* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03133 | PLN03133 | 1.0e-5 | 117 | 352 | 254 | + beta-1,3-galactosyltransferase; Provisional | ||
| pfam13334 | DUF4094 | 6.0e-23 | 21 | 113 | 93 | + Domain of unknown function (DUF4094). This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. | ||
| pfam01762 | Galactosyl_T | 1.0e-59 | 152 | 350 | 205 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| PLN03193 | PLN03193 | 0 | 1 | 406 | 412 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB36540.1 | 0 | 1 | 406 | 1 | 406 | Avr9 elicitor response like protein [Arabidopsis thaliana] |
| EMBL | CBI26647.1 | 0 | 10 | 406 | 7 | 405 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001077462.1 | 0 | 15 | 406 | 10 | 407 | galactosyltransferase family protein [Arabidopsis thaliana] |
| RefSeq | NP_172009.1 | 0 | 15 | 406 | 10 | 404 | galactosyltransferase family protein [Arabidopsis thaliana] |
| RefSeq | NP_567762.1 | 0 | 1 | 406 | 1 | 407 | galactosyltransferase family protein [Arabidopsis thaliana] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CF652213 | 308 | 84 | 391 | 0 |
| EX137442 | 285 | 93 | 377 | 0 |
| DY024991 | 253 | 85 | 337 | 0 |
| EG502363 | 308 | 1 | 306 | 0 |
| EX278792 | 300 | 109 | 407 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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