| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra010804 |
| Family | GH47 |
| Protein Properties | Length: 607 Molecular Weight: 67150.9 Isoelectric Point: 7.3278 |
| Chromosome | Chromosome/Scaffold: 08 Start: 16543172 End: 16545562 |
| Description | alpha-mannosidase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH47 | 126 | 603 | 0 |
| AFDYAWSGYRKYAMGYDELMPISQRGVDGLGGLGATVVDALDTAMIMGHGNIVSEAGSWVEAHLLERISQKGQVNLFETTIRVLGGLLSAYHLSGGDHGP KPDVYLNVAKDLADRLLSAFNSSPTAVPYSDVILRESTAHPAPGGMSSTAEVASVQLEFNYLSAVSGDPKYSAEAMKVLAHIKTLPKTEGLVPIYISPHS GEFVGENIRLGSRGDSYYEYLIKVWLQQGGKLNGNFTYLHDMYTEAMKGVRHLLVRKSIPKGLVFVGELPYGSKGEFSPKMDHLVCFLPGTLALGATKGL TKEKALAENLLSFEDLENLKLAEDLAKACFEMYEVTATGLAPEIAYFHTEEYSEDGLEGGNKSSAYAKDIIIKHADRHNLLRPETVESLFVLYRITKDTK YREQGWQIFEAFEKHTKVKSGGYTSLDDVTEVPPHRRDKMETFFLGETLKYLYLLFGDDSVIPLDKFVFNTEAHPLPI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 607 Download |
| MSKSLPYSVK DVHYDNAKFR HRSPLKVLSQ SLLTLNTKRD YASCSTGKFL ILILIFGIAC 60 LMLMGTNDSP LNEKGKVTFV GGLRLGRLLR KPPRLPPRLS PDEGQLKGNT TNSPKWAARQ 120 QSVKEAFDYA WSGYRKYAMG YDELMPISQR GVDGLGGLGA TVVDALDTAM IMGHGNIVSE 180 AGSWVEAHLL ERISQKGQVN LFETTIRVLG GLLSAYHLSG GDHGPKPDVY LNVAKDLADR 240 LLSAFNSSPT AVPYSDVILR ESTAHPAPGG MSSTAEVASV QLEFNYLSAV SGDPKYSAEA 300 MKVLAHIKTL PKTEGLVPIY ISPHSGEFVG ENIRLGSRGD SYYEYLIKVW LQQGGKLNGN 360 FTYLHDMYTE AMKGVRHLLV RKSIPKGLVF VGELPYGSKG EFSPKMDHLV CFLPGTLALG 420 ATKGLTKEKA LAENLLSFED LENLKLAEDL AKACFEMYEV TATGLAPEIA YFHTEEYSED 480 GLEGGNKSSA YAKDIIIKHA DRHNLLRPET VESLFVLYRI TKDTKYREQG WQIFEAFEKH 540 TKVKSGGYTS LDDVTEVPPH RRDKMETFFL GETLKYLYLL FGDDSVIPLD KFVFNTEAHP 600 LPIRNI* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1331 | COG1331 | 0.008 | 207 | 308 | 109 | + Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] | ||
| PTZ00470 | PTZ00470 | 1.0e-168 | 102 | 605 | 508 | + glycoside hydrolase family 47 protein; Provisional | ||
| pfam01532 | Glyco_hydro_47 | 0 | 126 | 603 | 481 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG52061.1 | 0 | 67 | 604 | 6 | 558 | AC022455_15 endoplasmic reticulum alpha-mannosidase, putative; 33510-31408 [Arabidopsis thaliana] |
| RefSeq | NP_564345.1 | 0 | 1 | 604 | 1 | 621 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
| RefSeq | XP_002275664.1 | 0 | 1 | 606 | 1 | 635 | PREDICTED: similar to glycoside hydrolase family 47 protein [Vitis vinifera] |
| RefSeq | XP_002306001.1 | 0 | 1 | 604 | 1 | 629 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519694.1 | 0 | 1 | 604 | 1 | 620 | endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1fo3_A | 0 | 119 | 603 | 10 | 456 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 1fo2_A | 0 | 119 | 603 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1fmi_A | 0 | 119 | 603 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1x9d_A | 0 | 119 | 603 | 88 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 1dl2_A | 0 | 120 | 603 | 6 | 494 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
