| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra010929 |
| Family | GT43 |
| Protein Properties | Length: 389 Molecular Weight: 44457.4 Isoelectric Point: 9.1975 |
| Chromosome | Chromosome/Scaffold: 08 Start: 17173594 End: 17175419 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT43 | 157 | 364 | 0 |
| AQTLRLVEAPVLWIVVEGNAASFETSEILRKTGVMYRHLVCKRNMTSVKDRGVHQRNTALEHIELHKLDGVVYFADDDNIYSLELFQSLRQIRRFGTWPV AMLAPSKNKAILEGPVCNGSQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPFSHPTRQLDTVKEGFQETTFIEQVVADERDMEGVPPACSR ILNWHLHL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 389 Download |
| MASIRRTLSP VYHDRHYENG GAPFSPSSTS SSPSQKSSGK HSSSSDPKAS RRGPWRRPFY 60 QFLAFFLIGF LLGMTPYGQI DDANGTDRDR FNFEIKPPNV EESLERREEV AVDGVSFSAE 120 SKNKKEEEED FAPRKLVIVV TPTYNRAMQA YYLNRVAQTL RLVEAPVLWI VVEGNAASFE 180 TSEILRKTGV MYRHLVCKRN MTSVKDRGVH QRNTALEHIE LHKLDGVVYF ADDDNIYSLE 240 LFQSLRQIRR FGTWPVAMLA PSKNKAILEG PVCNGSQVIG WHTNEKSKRL RRFHVDMSGF 300 AFNSTILWDP KRWRRPFSHP TRQLDTVKEG FQETTFIEQV VADERDMEGV PPACSRILNW 360 HLHLDALDVP YPQGWVVQKN LEALITVK* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02458 | PLN02458 | 2.0e-83 | 132 | 364 | 240 | + transferase, transferring glycosyl groups | ||
| pfam03360 | Glyco_transf_43 | 1.0e-87 | 156 | 366 | 220 | + Glycosyltransferase family 43. | ||
| cd00218 | GlcAT-I | 5.0e-110 | 135 | 366 | 238 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD45998.1 | 0 | 1 | 372 | 1 | 379 | AC005916_10 Contains similarity to gb |
| GenBank | AAF24965.1 | 0 | 1 | 332 | 1 | 338 | AC012375_28 T22C5.4 [Arabidopsis thaliana] |
| GenBank | AAM64331.1 | 0 | 80 | 388 | 1 | 308 | glycoprotein-specific UDP-glucuronyltransferase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_973922.1 | 0 | 1 | 388 | 1 | 394 | glycosyl transferase family 43 protein [Arabidopsis thaliana] |
| RefSeq | XP_002301102.1 | 0 | 1 | 388 | 1 | 395 | glycosyl transferase [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2d0j_D | 1e-30 | 137 | 369 | 5 | 231 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 2d0j_C | 1e-30 | 137 | 369 | 5 | 231 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 2d0j_B | 1e-30 | 137 | 369 | 5 | 231 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 2d0j_A | 1e-30 | 137 | 369 | 5 | 231 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 1v84_B | 3e-29 | 139 | 361 | 7 | 230 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
