Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra011324 |
Family | GT31 |
Protein Properties | Length: 349 Molecular Weight: 39374.9 Isoelectric Point: 8.5368 |
Chromosome | Chromosome/Scaffold: 01 Start: 2728517 End: 2730754 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 136 | 328 | 3.64338e-44 |
KRNKFRGSWMPRDDALKKLEERGVVIRFVIGRSANRGDSLDRKIDQENLATKDFLILENHEEAQEELPKKVKFFYSAAVQNWDAEFYVKVDDNVDLDLEG LIGLLESRRGQDGAYIGCMKSGDVVTQEGSQWYEPEWWKFGDDKSYFRHATGSLVILSKNLAQYININSGLLKTYAFDDTTIGSWMIGVQATY |
Full Sequence |
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Protein Sequence Length: 349 Download |
MESLPTTVSS KSDRRGRSSK SQNTSKPSLI MAFFSCLAWL YVAGRLWQDA QHRVALNIVL 60 QKNLELRPKA LTVDDKLMVL GCKDLERRIV ETEMELAQAK SQGYLKNQKS LSSASSGNKK 120 MLAVIGVYTG FGSHLKRNKF RGSWMPRDDA LKKLEERGVV IRFVIGRSAN RGDSLDRKID 180 QENLATKDFL ILENHEEAQE ELPKKVKFFY SAAVQNWDAE FYVKVDDNVD LDLEGLIGLL 240 ESRRGQDGAY IGCMKSGDVV TQEGSQWYEP EWWKFGDDKS YFRHATGSLV ILSKNLAQYI 300 NINSGLLKTY AFDDTTIGSW MIGVQATYID DNRLCCSSTR QEKVCSMA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam13334 | DUF4094 | 3.0e-14 | 24 | 102 | 91 | + Domain of unknown function (DUF4094). This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. | ||
pfam01762 | Galactosyl_T | 1.0e-26 | 137 | 331 | 201 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03193 | PLN03193 | 7.0e-77 | 58 | 338 | 289 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC42946.1 | 0 | 63 | 348 | 2 | 284 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_180102.3 | 0 | 1 | 348 | 1 | 346 | transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | NP_194939.1 | 0 | 1 | 348 | 1 | 345 | galactosyltransferase family protein [Arabidopsis thaliana] |
RefSeq | XP_002285482.1 | 0 | 12 | 348 | 4 | 339 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002515480.1 | 0 | 1 | 347 | 1 | 345 | galactosyltransferase, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BU635948 | 230 | 120 | 349 | 0 |
GR459857 | 265 | 85 | 349 | 0 |
EX042117 | 219 | 1 | 219 | 0 |
EX090015 | 219 | 45 | 263 | 0 |
EX762798 | 242 | 25 | 266 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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