| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra011514 |
| Family | GH95 |
| Protein Properties | Length: 797 Molecular Weight: 88143.4 Isoelectric Point: 6.9655 |
| Chromosome | Chromosome/Scaffold: 01 Start: 1863159 End: 1867079 |
| Description | 1,2-alpha-L-fucosidases |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH95 | 7 | 772 | 0 |
| SRPLKLTFAGPSRNWTDAIPIGNGRLGATIWGGVSSETLNINEDTIWTGVPADYTNPNAPEALAQVRKLVDERKYPEATSEAVKLSGHPSDVYQLVGDLN LQFDSSHRKYTQASYRRELDLETALAKVSYSVGAVEFSREFFASHPDQVIVLKISSSKPGSLSFKASFDSDLHHHSETKGNQILMQGSCRPKRLPVNLSK SINATNIPYDDHKGLQFAAALEVRVSSGGSVSSLGGKKLSVEKADWAVLVLTAASNFDGPFTMPVDSKRDPSKECVDRISSVQRYSYSDLYGRHLGDYQK LFNRVSLQLSGGGNKTEAASTAERVRSFRKDEDPSLVELLFQYGRYLLISSSRPGTQVANLQGIWNRDIQPPWDGAPHLNINLQMNYWHSLPANIMECQE PLFDYMSALAINGRKTAQVNYGASGWVAHQVSDIWAKTSPDRGEAVWALWPMGGAWLCTHAWEHYTYTMDKEFLKKKGYPLLEGCTSFLLDWLIKGKDGY LQTNPSTSPEHMFTSPDGKPASVSYSSTMDIAIVKEVFSAIVSASEVLGKTNDTLIAKVIAAQGNLPPTRLSKDGSIMEWAEDFEDPEVHHRHVSHLFGL FPGHSITLEKSPELAKAVEVSLKKRGEEGPGWSTTWKAALWARLHNSEHAYRLVTHIFDLVDPLNERNYEGGLYTNLFTAHPPFQIDANFGFSAAVAEML VQSTTKDLYLLPALPADKWPNGYVKGLRARGGVTVNIRWTEGSLVEFGLSSEQSVSTRIVYRGNSV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 797 Download |
| MDGHDLSRPL KLTFAGPSRN WTDAIPIGNG RLGATIWGGV SSETLNINED TIWTGVPADY 60 TNPNAPEALA QVRKLVDERK YPEATSEAVK LSGHPSDVYQ LVGDLNLQFD SSHRKYTQAS 120 YRRELDLETA LAKVSYSVGA VEFSREFFAS HPDQVIVLKI SSSKPGSLSF KASFDSDLHH 180 HSETKGNQIL MQGSCRPKRL PVNLSKSINA TNIPYDDHKG LQFAAALEVR VSSGGSVSSL 240 GGKKLSVEKA DWAVLVLTAA SNFDGPFTMP VDSKRDPSKE CVDRISSVQR YSYSDLYGRH 300 LGDYQKLFNR VSLQLSGGGN KTEAASTAER VRSFRKDEDP SLVELLFQYG RYLLISSSRP 360 GTQVANLQGI WNRDIQPPWD GAPHLNINLQ MNYWHSLPAN IMECQEPLFD YMSALAINGR 420 KTAQVNYGAS GWVAHQVSDI WAKTSPDRGE AVWALWPMGG AWLCTHAWEH YTYTMDKEFL 480 KKKGYPLLEG CTSFLLDWLI KGKDGYLQTN PSTSPEHMFT SPDGKPASVS YSSTMDIAIV 540 KEVFSAIVSA SEVLGKTNDT LIAKVIAAQG NLPPTRLSKD GSIMEWAEDF EDPEVHHRHV 600 SHLFGLFPGH SITLEKSPEL AKAVEVSLKK RGEEGPGWST TWKAALWARL HNSEHAYRLV 660 THIFDLVDPL NERNYEGGLY TNLFTAHPPF QIDANFGFSA AVAEMLVQST TKDLYLLPAL 720 PADKWPNGYV KGLRARGGVT VNIRWTEGSL VEFGLSSEQS VSTRIVYRGN SVATTLSPGK 780 VFTFDKDLKC IRTEKL* 840 |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB36703.1 | 0 | 1 | 796 | 43 | 847 | hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_195152.2 | 0 | 1 | 796 | 43 | 843 | FUC95A; 1,2-alpha-L-fucosidase [Arabidopsis thaliana] |
| RefSeq | XP_002298754.1 | 0 | 7 | 796 | 9 | 802 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313154.1 | 0 | 2 | 796 | 5 | 797 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527476.1 | 0 | 5 | 796 | 32 | 843 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2rdy_B | 0 | 10 | 768 | 3 | 755 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
| PDB | 2rdy_A | 0 | 10 | 768 | 3 | 755 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
| PDB | 2eac_B | 0 | 25 | 759 | 52 | 843 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
| PDB | 2eac_A | 0 | 25 | 759 | 52 | 843 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
| PDB | 2eab_B | 0 | 25 | 759 | 52 | 843 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum (Apo Form) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX135781 | 299 | 1 | 299 | 0 |
| EX137188 | 269 | 478 | 746 | 0 |
| EX080045 | 254 | 382 | 635 | 0 |
| EX078562 | 240 | 382 | 621 | 0 |
| EX263860 | 300 | 368 | 667 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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