| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra011577 |
| Family | GH35 |
| Protein Properties | Length: 846 Molecular Weight: 95516.4 Isoelectric Point: 9.7727 |
| Chromosome | Chromosome/Scaffold: 01 Start: 1603969 End: 1607996 |
| Description | beta-galactosidase 11 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 47 | 351 | 0 |
| LIVDGKRELLFSGSIHYPRSTPEMWPSIIKRAKQGGLNTIQTYVFWNVHEPEQGKFNFSGRADLVKFIKLIQKNGMYVTLRLGPFIQAEWTHGGLPYWLR EVPGIFFRTDNKQFKEHTERYVRMILDKMKEEKLFASQGGPIILGQIENEYSAVQRAYKEDGLNYIKWGSKLVDSMNLGIPWVMCKQNDAPDPMINACNG RHCGDTFPGPNKDNKPSMWTENWTTQFRVFGDAPVKRSVEDIAFSVARFFSKNGSHVNYYMYHGGTNFGRTSAHYVTTRYYDDAPLDEYGLEREPKYGHL KHLHN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 846 Download |
| MRKHSLDRWF LTAILVVLLS SSCTFASKKE MKKKTKGKEV TYDGTSLIVD GKRELLFSGS 60 IHYPRSTPEM WPSIIKRAKQ GGLNTIQTYV FWNVHEPEQG KFNFSGRADL VKFIKLIQKN 120 GMYVTLRLGP FIQAEWTHGG LPYWLREVPG IFFRTDNKQF KEHTERYVRM ILDKMKEEKL 180 FASQGGPIIL GQIENEYSAV QRAYKEDGLN YIKWGSKLVD SMNLGIPWVM CKQNDAPDPM 240 INACNGRHCG DTFPGPNKDN KPSMWTENWT TQFRVFGDAP VKRSVEDIAF SVARFFSKNG 300 SHVNYYMYHG GTNFGRTSAH YVTTRYYDDA PLDEYGLERE PKYGHLKHLH NALNLCKKPL 360 LWGQPRTEKP GKDTEIRYYE QPGTKSCAAF LANNNTEAAE TIKFRGRDYV IAPRSISILP 420 DCKTVVYNTA QIVSHHTSRN FMKSKQANKK KFDFKVFTEP LPKKLEGNSY VPVELYGLTK 480 DKSDYGWYTT SFKVHENHLP KKKGAKTNLR IASLGHALHV WLNGEYLGNG HGSHDEKSFV 540 FQKPVTLKAG ENHLVMLGVL TGFPDSGSYL EHRYTGPRSV SILGLSSGTL DLTESSKWGN 600 KVGMEGERLG IQTEKGLKKV KWEKFSGKAP GITWYQTYFD APESESAAAI RMSGMGKGLI 660 WVNGEGVGRY WMSFLNPLGQ STQIEYHIPR SFLKPKKNLL VIFEEEPNVK PELIDFVIVN 720 RDTVCSFVGE NYTPSVGHWI RKQDEVKAIT DNVSLTATLK CSGNKKIAAV EFASFGNPIG 780 DCGNFTLGTC NAPVSKQVVE KHCLGKAECV IPVNKSTFQQ DKKDSCKNVV KTLAVQVKCA 840 RDKKN* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 1.0e-9 | 62 | 197 | 150 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 8.0e-18 | 759 | 839 | 84 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 2.0e-23 | 40 | 315 | 306 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 6.0e-152 | 46 | 353 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 40 | 840 | 828 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD24606.1 | 0 | 43 | 845 | 31 | 832 | putative beta-galactosidase [Arabidopsis thaliana] |
| EMBL | CAA17766.1 | 0 | 38 | 845 | 52 | 831 | beta-galactosidase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_179264.2 | 0 | 39 | 845 | 43 | 848 | BGAL13; beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | NP_567973.1 | 0 | 1 | 845 | 1 | 845 | BGAL11 (beta-galactosidase 11); beta-galactosidase [Arabidopsis thaliana] |
| Swiss-Prot | Q9SCU8 | 0 | 1 | 841 | 7 | 839 | BGL14_ARATH RecName: Full=Beta-galactosidase 14; Short=Lactase 14; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 9.00054e-42 | 46 | 349 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 4e-35 | 39 | 349 | 10 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 4e-35 | 39 | 349 | 10 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
