y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra011677 |
Family | GH35 |
Protein Properties | Length: 857 Molecular Weight: 95069.9 Isoelectric Point: 7.9233 |
Chromosome | Chromosome/Scaffold: 01 Start: 1103740 End: 1107785 |
Description | beta-galactosidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 40 | 343 | 0 |
LLINGQRRILFSGSIHYPRSTPDMWEGLIQKAKDGGVDVIETYVFWNLHEPSPGKYDFEGRNDLVRFVKTIHKAGLYAHLRIGPYVCAEWNFGGFPVWLK YVPGISFRTDNEPFKRAMQGFTERIVQLMKSENLYESQGGPIILSQIENEYGRQGQLLGAEGHNYMTWAAKMAIATETGVPWVMCKEDDAPDPVINTCNG FYCDSFAPNKPYKPLIWTEAWSGWFTEFGGPMHHRPVQDLAFAVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFVTTSYDYDAPIDEYGLIREPKYGHLK ELHR |
Full Sequence |
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Protein Sequence Length: 857 Download |
MLRMGTGDTA PRLILWLCLG FLILGVGFVQ CGVTYDRKAL LINGQRRILF SGSIHYPRST 60 PDMWEGLIQK AKDGGVDVIE TYVFWNLHEP SPGKYDFEGR NDLVRFVKTI HKAGLYAHLR 120 IGPYVCAEWN FGGFPVWLKY VPGISFRTDN EPFKRAMQGF TERIVQLMKS ENLYESQGGP 180 IILSQIENEY GRQGQLLGAE GHNYMTWAAK MAIATETGVP WVMCKEDDAP DPVINTCNGF 240 YCDSFAPNKP YKPLIWTEAW SGWFTEFGGP MHHRPVQDLA FAVARFIQKG GSFVNYYMYH 300 GGTNFGRTAG GPFVTTSYDY DAPIDEYGLI REPKYGHLKE LHRAIKMCEK ALVSTDPVVT 360 SLGNKQQAHV YSSESGECSA FLANYDTESA ARVLFNNVHY NLPPWSISIL PDCRNAVFNT 420 AKVGVQTSQM EMLPTSTPNF QWQSYLEDLS SLDDSSTFTT QGLLEQINVT RDTSDYLWYM 480 TSVDIGSTES FLHGGELPTL IIQSTGHAVH IFVNGQLSGS AFGTRQNRRF TYRGKINLHS 540 GTNRIALLSV AVGLPNVGGH FESWNTGILG PVALHGLSQG KRDLSWQKWT YQVGLKGEAM 600 NLAYPTNTPS NGWMDASLVA QKSQPLTWHK AYFDAPEGNE PLALDMEGMG KGQVWVNGES 660 IGRYWTAFAT GDCGHCSYTG TYKPNKCLSG CGQPTQRYYH VPRSWLKPSQ NLLVIFEELG 720 GNPSAVSLVK RSVSGVCAEV SEYHPNIKNW QIESYGKGQT FRRPKVHLKC SPGQAISAIK 780 FASFGTPLGK CGSYQQGECH ATTSYAILER KCVGKARCAV TISNSNFGKD PCPNVLKRLT 840 VEAVCSPETS ITSWKP* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 1.0e-6 | 55 | 191 | 153 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 3.0e-22 | 33 | 335 | 363 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 2.0e-22 | 768 | 845 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 5.0e-168 | 39 | 345 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 26 | 846 | 822 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA18137.1 | 0 | 1 | 856 | 1 | 853 | beta-galactosidase like protein [Arabidopsis thaliana] |
EMBL | CAB16852.1 | 0 | 4 | 856 | 1 | 853 | beta-galactosidase like protein [Arabidopsis thaliana] |
RefSeq | NP_568001.1 | 0 | 1 | 856 | 1 | 856 | BGAL3 (beta-galactosidase 3); beta-galactosidase/ catalytic/ cation binding / sugar binding [Arabidopsis thaliana] |
RefSeq | NP_849506.1 | 0 | 1 | 856 | 1 | 855 | BGAL3 (beta-galactosidase 3); beta-galactosidase/ catalytic/ cation binding / sugar binding [Arabidopsis thaliana] |
RefSeq | XP_002310279.1 | 0 | 17 | 855 | 9 | 846 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 37 | 341 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.002 | 499 | 736 | 399 | 591 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 4.00001e-41 | 33 | 357 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 4.00001e-41 | 33 | 357 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |