| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra011683 |
| Family | AA2 |
| Protein Properties | Length: 724 Molecular Weight: 80967.5 Isoelectric Point: 9.1875 |
| Chromosome | Chromosome/Scaffold: 01 Start: 1066963 End: 1072287 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 447 | 704 | 0 |
| ARETRMAASLMRLHFHDCFVQGCDGSLLLDSSGRIVSEKSSNPNSKSARGFEVVDQIKAQLEKQCPGTVSCADILTLAARDSSVLTGGPSWMVPLGRRDS RSASLSGSNNNIPAPNNTFQTILSKFNRQGLDVTDLVALSGSHTIGFSRCTSFRQRLYNQSGNGRPDMTLEQSFAANLRQRCPRSGGDQNLSVLDIVSAA KFDNSYFKNLIENMGLLNSDQVLFSSNDKSRDLVKKYAEDQEEFFEQFAESMIKMGNI | |||
| Full Sequence |
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| Protein Sequence Length: 724 Download |
| MKPRMGSFKK RSSSKNLRYS MKRRTSSKVT PVEIEDVHDA EELKSVDAFR QALILDELLP 60 EKHDDYHMML RFLKARKFDL DKTKLMWTEM LRWRKEFGAD TVMEEFEFKE IDEVLKYYPQ 120 GHHGVDKEGR PVYIERLGQV DSTKLMQVTT LDRYVNYHVM EFERTFNVKF PACSIAAKKQ 180 IDQSTTILDV QGVGLKNFNK AARDLVTRLQ AVDGNNYPES LNRMFIINAG SGFRMLWSTV 240 KSFLDPKTTA KINAKEVYAI QEACNTATSD GGRSPIFTGV MALVMGVVTM IRVTKNVPRK 300 LTESTLYSSP MYCDDASMNK SAMQSEKMMV PAISGEDFMA IMKRMAELEQ KVTVLSAQPT 360 TMPPEKEEML NAAISRSNVL EQELAATKKA LDDSLGRQED LVAYIEKKKK KKKLSQSNGG 420 KLNPGFYAHS CPQAGEIVRS VVAQAVARET RMAASLMRLH FHDCFVQGCD GSLLLDSSGR 480 IVSEKSSNPN SKSARGFEVV DQIKAQLEKQ CPGTVSCADI LTLAARDSSV LTGGPSWMVP 540 LGRRDSRSAS LSGSNNNIPA PNNTFQTILS KFNRQGLDVT DLVALSGSHT IGFSRCTSFR 600 QRLYNQSGNG RPDMTLEQSF AANLRQRCPR SGGDQNLSVL DIVSAAKFDN SYFKNLIENM 660 GLLNSDQVLF SSNDKSRDLV KKYAEDQEEF FEQFAESMIK MGNISPLTGS SGEIRKDCRK 720 INS* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00516 | SEC14 | 1.0e-27 | 110 | 252 | 143 | + Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. | ||
| cd00170 | SEC14 | 7.0e-29 | 111 | 252 | 143 | + Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. | ||
| pfam00141 | peroxidase | 2.0e-65 | 438 | 591 | 154 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 1.0e-81 | 414 | 722 | 315 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 1.0e-167 | 421 | 721 | 301 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM61616.1 | 0 | 420 | 723 | 34 | 337 | putative peroxidase [Arabidopsis thaliana] |
| RefSeq | NP_179406.1 | 0 | 418 | 723 | 31 | 336 | peroxidase, putative [Arabidopsis thaliana] |
| RefSeq | NP_179407.1 | 0 | 420 | 723 | 34 | 337 | peroxidase, putative [Arabidopsis thaliana] |
| RefSeq | NP_195361.1 | 0 | 416 | 723 | 24 | 331 | peroxidase, putative [Arabidopsis thaliana] |
| RefSeq | XP_002521512.1 | 0 | 416 | 723 | 24 | 331 | Peroxidase 72 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1qo4_A | 0 | 421 | 722 | 2 | 304 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| PDB | 1pa2_A | 0 | 421 | 722 | 2 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 4a5g_B | 0 | 419 | 722 | 1 | 305 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 4a5g_A | 0 | 419 | 722 | 1 | 305 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 1sch_B | 0 | 421 | 722 | 1 | 294 | A Chain A, Peanut Peroxidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX133028 | 264 | 416 | 679 | 0 |
| FY444147 | 263 | 417 | 679 | 0 |
| GR452981 | 249 | 1 | 249 | 0 |
| FY441061 | 255 | 417 | 671 | 0 |
| FY444174 | 265 | 416 | 680 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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