y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra011745 |
Family | GT43 |
Protein Properties | Length: 519 Molecular Weight: 58116.8 Isoelectric Point: 9.3427 |
Chromosome | Chromosome/Scaffold: 01 Start: 766378 End: 768571 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 170 | 415 | 0 |
MHSLMLVPYDVVWIVVEAGGVSNETASIVGKSGVRVIHVGFDQRMPNTWEDRGKVEVLMRLRALRVVKEEKLDGVVMFADDSNMHSMEFFDEIQNVKWFG AVSVGILAHSGNAEEMVMSMDKRREMEEEESSSLSSLPVQGPACNATDKLIGWHVFNTLPYAGKSAVYIDDVAAVLPQKLEWCGFVLNSRILWDEAESKP EWVKEFGLLNENEGVESPLSLLNDPSMVEPLGSCGRQVLLWWLRVE |
Full Sequence |
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Protein Sequence Length: 519 Download |
MKLSALHQSY LNRRRSPLDS SVDASSKSFL AVFWLVLHCL CCLISLLLGF RFSRLVFFFL 60 VSTPSSSNLY SPPFRPDLPP PRIDLTPSNA TTAEAKTSSS RVVVGRHGIL IRPWPHPDPV 120 EVMKAHRIIE RVQREQKAVF GAGAKGSRTV IAVTPTYVRT FQALHLNGVM HSLMLVPYDV 180 VWIVVEAGGV SNETASIVGK SGVRVIHVGF DQRMPNTWED RGKVEVLMRL RALRVVKEEK 240 LDGVVMFADD SNMHSMEFFD EIQNVKWFGA VSVGILAHSG NAEEMVMSMD KRREMEEEES 300 SSLSSLPVQG PACNATDKLI GWHVFNTLPY AGKSAVYIDD VAAVLPQKLE WCGFVLNSRI 360 LWDEAESKPE WVKEFGLLNE NEGVESPLSL LNDPSMVEPL GSCGRQVLLW WLRVEARADS 420 KFPPGWVIDP PLEITVAAKR TPWPDVPPEP PTKKKDQMSL SQGNNNVVVI PKHQQQQQQR 480 SSKVRKPKRR SKRNKHEAKP TDTATQVSSS TKHHQERN* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02458 | PLN02458 | 1.0e-15 | 119 | 363 | 248 | + transferase, transferring glycosyl groups | ||
pfam03360 | Glyco_transf_43 | 4.0e-53 | 169 | 416 | 258 | + Glycosyltransferase family 43. | ||
cd00218 | GlcAT-I | 2.0e-57 | 148 | 416 | 274 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB16800.1 | 0 | 13 | 518 | 36 | 544 | UDP-glucuronyltransferase-like protein [Arabidopsis thaliana] |
RefSeq | NP_195407.2 | 0 | 1 | 518 | 1 | 525 | IRX14 (irregular xylem 14); transferase, transferring glycosyl groups / xylosyltransferase [Arabidopsis thaliana] |
RefSeq | XP_002283249.1 | 0 | 1 | 456 | 1 | 468 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306485.1 | 0 | 1 | 518 | 1 | 503 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002310709.1 | 0 | 1 | 483 | 1 | 477 | glycosyl transferase, CAZy family GT43 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v84_B | 0.000000002 | 149 | 434 | 4 | 253 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1v84_A | 0.000000002 | 149 | 434 | 4 | 253 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1v83_B | 0.000000002 | 149 | 434 | 4 | 253 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1v83_A | 0.000000002 | 149 | 434 | 4 | 253 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1v82_B | 0.000000002 | 149 | 434 | 4 | 253 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |