| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra011882 |
| Family | GH9 |
| Protein Properties | Length: 493 Molecular Weight: 54836.1 Isoelectric Point: 6.5696 |
| Chromosome | Chromosome/Scaffold: 01 Start: 89555 End: 91876 |
| Description | glycosyl hydrolase 9B17 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 24 | 483 | 0 |
| NYSDALHKSILFFEGQRSGRLPRQQRMLWRGDSALKDGENLNTDLVGGYYDAGDNVKFHFPMAFTATMLAWSSIDFSCYMSDNDFRHTLVNIKWATDYLL KTVSQLPHRIFVQVGEAQPDHNCWERPEDMDTPRTAFALDAPGPASDLAGEIAAALAAASIAFKQSRPTYSKLLLSKAIQTFQYADMHRGSYADNQNVHN AACPFYCSNNGYKDELLWGAAWLRRATGSDNYLEYLVNNRETFGVDYNYLDFGWDSKFGGVDVLIAKEVFEKNVSALTPFKDIAEKMMCAVFPETAGLHM SYTPGGLLYKPVGSQLQSTAAMSFLILTYADYLSKSSQQLSCGNLKFQPDSLRRIVKRQVDYILGDNPMHVSYMVGYGDQYPRQVHHRGSSIPSVKVQST AFGCTQGWNIFHSDNPNPNILVGAVVGGPNVDDTFIGKRTNATDTEPTTYINAPLVGVFA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 493 Download |
| MKPSILILTV FVLLLLVPTV IPHNYSDALH KSILFFEGQR SGRLPRQQRM LWRGDSALKD 60 GENLNTDLVG GYYDAGDNVK FHFPMAFTAT MLAWSSIDFS CYMSDNDFRH TLVNIKWATD 120 YLLKTVSQLP HRIFVQVGEA QPDHNCWERP EDMDTPRTAF ALDAPGPASD LAGEIAAALA 180 AASIAFKQSR PTYSKLLLSK AIQTFQYADM HRGSYADNQN VHNAACPFYC SNNGYKDELL 240 WGAAWLRRAT GSDNYLEYLV NNRETFGVDY NYLDFGWDSK FGGVDVLIAK EVFEKNVSAL 300 TPFKDIAEKM MCAVFPETAG LHMSYTPGGL LYKPVGSQLQ STAAMSFLIL TYADYLSKSS 360 QQLSCGNLKF QPDSLRRIVK RQVDYILGDN PMHVSYMVGY GDQYPRQVHH RGSSIPSVKV 420 QSTAFGCTQG WNIFHSDNPN PNILVGAVVG GPNVDDTFIG KRTNATDTEP TTYINAPLVG 480 VFAYFNSNPN IT* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02613 | PLN02613 | 4.0e-160 | 24 | 483 | 463 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 2.0e-164 | 24 | 483 | 466 | + Glycosyl hydrolase family 9. | ||
| PLN03009 | PLN03009 | 0 | 23 | 490 | 468 | + cellulase | ||
| PLN02266 | PLN02266 | 0 | 23 | 485 | 463 | + endoglucanase | ||
| PLN02308 | PLN02308 | 0 | 23 | 490 | 468 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK28672.1 | 0 | 24 | 492 | 25 | 493 | unknown [Arabidopsis thaliana] |
| EMBL | CAB38821.1 | 0 | 23 | 489 | 6 | 472 | putative endo-1, 4-beta-glucanase [Arabidopsis thaliana] |
| RefSeq | NP_195611.1 | 0 | 24 | 492 | 25 | 493 | AtGH9B17 (Arabidopsis thaliana glycosyl hydrolase 9B17); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_568050.1 | 0 | 23 | 489 | 28 | 494 | AtGH9B18 (Arabidopsis thaliana glycosyl hydrolase 9B18); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| Swiss-Prot | Q9SVJ4 | 0 | 1 | 489 | 1 | 493 | GUN22_ARATH RecName: Full=Endoglucanase 22; AltName: Full=Endo-1,4-beta glucanase 22; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 21 | 483 | 1 | 426 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 1ksc_A | 0 | 21 | 483 | 1 | 426 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 1ks8_A | 0 | 21 | 483 | 1 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 24 | 483 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 24 | 483 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
