Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra011946 |
Family | GH35 |
Protein Properties | Length: 846 Molecular Weight: 91987.1 Isoelectric Point: 7.5793 |
Chromosome | Chromosome/Scaffold: 07 Start: 11049260 End: 11053437 |
Description | beta-galactosidase 8 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 33 | 336 | 0 |
LVIDGKRKILISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNGHEPEKNKYNFEGRYDLVKFVKLAAKAGLYVHLRIGPYACAEWNYGGFPVWLH FVPGIKFRTDNEPFKAEMQRFTAKIVDLMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYMKWSASMALSLDTGVPWNMCQQGDAPDPIINTCNG FYCDQFTPNSNNKPKMWTENWSGWFLGFGEPTPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFERTSGGPLISTSYDYDAPIDEYGLLRQPKWGHLR DLHK |
Full Sequence |
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Protein Sequence Length: 846 Download |
MVRGKKVEIV SLLILVIVMA ATAATVTYDH RALVIDGKRK ILISGSIHYP RSTPEMWPDL 60 IQKSKDGGLD VIETYVFWNG HEPEKNKYNF EGRYDLVKFV KLAAKAGLYV HLRIGPYACA 120 EWNYGGFPVW LHFVPGIKFR TDNEPFKAEM QRFTAKIVDL MKQEKLYASQ GGPIILSQIE 180 NEYGNIDSAY GAAGKSYMKW SASMALSLDT GVPWNMCQQG DAPDPIINTC NGFYCDQFTP 240 NSNNKPKMWT ENWSGWFLGF GEPTPYRPVE DLAFAVARFF QRGGTFQNYY MYHGGTNFER 300 TSGGPLISTS YDYDAPIDEY GLLRQPKWGH LRDLHKAIKL CEDALIATDP EITSLGSNLE 360 AAVYKTSSGS CAAFLANIGT QSDATVTFNG KSYRLPAWSV SILPDCKNVA FNTAKINSAT 420 ESTAFARQSL KPDGGSSAEL GSQWSHIKEP IGISEADALV KPGLLEQINT TADKSDYLWY 480 SLRMDIKGDE TFLDEGSKAV LHIQSIGQVV YAFINGKLAG SGNDRTNISL DIPINLVTGK 540 NTIDLLSVTV GLANYGAFFD IIGAGITGPV SLNSAKTGSS MDLSSHQWTY QVGLKGEDTG 600 LGSGDSSEWV SNSPLPTNQP LVWYKTTFDA PSGSEPVAID FTGTGKGIAW VNGQSIGRYW 660 PTSIARTDGC VGSCNYRGTY RNDKCLKNCG KPSQTLYHVP RSWIKPSGNT LVLLEEMGGD 720 PTKISFATKH TGSNLCLKVS ESHPAPVDTW TSDSKFSNRT SPAVLSLKCP VSTQVISSIR 780 FASFGTPTGS CGSFSHGRCN SARSLSVVQK ACVGSRSCKV EVSTRVFGEP CHGVVKSLAV 840 EAVCA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 2.0e-7 | 48 | 200 | 170 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 6.0e-22 | 767 | 844 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 2.0e-26 | 28 | 328 | 365 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 2.0e-172 | 32 | 338 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 28 | 845 | 825 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD21482.1 | 0 | 29 | 845 | 29 | 839 | putative beta-galactosidase [Arabidopsis thaliana] |
DDBJ | BAD20774.2 | 0 | 1 | 845 | 7 | 851 | beta-galactosidase [Raphanus sativus] |
EMBL | CAB64744.1 | 0 | 29 | 845 | 35 | 852 | putative beta-galactosidase [Arabidopsis thaliana] |
RefSeq | NP_850121.1 | 0 | 29 | 845 | 35 | 852 | BGAL8 (beta-galactosidase 8); beta-galactosidase/ catalytic/ cation binding / sugar binding [Arabidopsis thaliana] |
RefSeq | XP_002530296.1 | 0 | 4 | 844 | 2 | 841 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 1.4013e-45 | 19 | 334 | 1 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.0006 | 541 | 718 | 439 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 5e-38 | 33 | 321 | 10 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 0.009 | 619 | 735 | 505 | 595 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 5e-38 | 33 | 321 | 10 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |