y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra012015 |
Family | GH17 |
Protein Properties | Length: 418 Molecular Weight: 46264.2 Isoelectric Point: 7.6687 |
Chromosome | Chromosome/Scaffold: 07 Start: 10597210 End: 10599313 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 31 | 348 | 0 |
VGINYGQIANNLPSPARVAVLLRSLNITRVKLYDADPNVLSSFSNSQVDFMIGLGNEFLQNMSTDPTKAQSWIQQRLQPHIAKTRITSIVVGNEIFKTND RVLISSLLPAMKAVYSALTNLGLEKQVTVTSAHSLDMLQTSYTSSSGSFRQEFIQFLQPLLDFHAQIKSPFLINAYPFFAYMDSPKEIPLEYVLFQPNQG MVDPNTNLHYDNMLFAQVDALYAAIKTLGHTDVEVRISETGWPSKGDENEIGATPENAALYNGNLLRLVQQRKGTPGKKSVPIDVYVFALFNENLKPGPT SERNYGLFYPDGKPVYNV |
Full Sequence |
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Protein Sequence Length: 418 Download |
MATRSLFFFK VLLLFLALSD SFSATSNGQG VGINYGQIAN NLPSPARVAV LLRSLNITRV 60 KLYDADPNVL SSFSNSQVDF MIGLGNEFLQ NMSTDPTKAQ SWIQQRLQPH IAKTRITSIV 120 VGNEIFKTND RVLISSLLPA MKAVYSALTN LGLEKQVTVT SAHSLDMLQT SYTSSSGSFR 180 QEFIQFLQPL LDFHAQIKSP FLINAYPFFA YMDSPKEIPL EYVLFQPNQG MVDPNTNLHY 240 DNMLFAQVDA LYAAIKTLGH TDVEVRISET GWPSKGDENE IGATPENAAL YNGNLLRLVQ 300 QRKGTPGKKS VPIDVYVFAL FNENLKPGPT SERNYGLFYP DGKPVYNVGL QGYLPDIIYS 360 SSASTIKTLN LWRAVMGLAV AGLIGLDMGV KMRMPLIIGL YLFALQESYC YGYTYSL* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-6 | 103 | 341 | 242 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-95 | 31 | 348 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU21124.1 | 0 | 26 | 368 | 32 | 373 | unknown [Glycine max] |
RefSeq | NP_001031432.1 | 0 | 81 | 394 | 1 | 313 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_565652.1 | 0 | 28 | 394 | 26 | 391 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_973548.1 | 0 | 28 | 367 | 26 | 365 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002328249.1 | 0 | 28 | 367 | 26 | 364 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 31 | 348 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 31 | 348 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 31 | 348 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 31 | 348 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 31 | 348 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |