| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra012145 |
| Family | GT43 |
| Protein Properties | Length: 473 Molecular Weight: 53161.4 Isoelectric Point: 9.8583 |
| Chromosome | Chromosome/Scaffold: 07 Start: 9776771 End: 9778268 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT43 | 170 | 408 | 0 |
| MHSLMLVPYDVVWIVVEAGGKTNETASFVGKSRLKTVHVGFDQKMPNTWEDRRRVESKMRIQGLRIVREEKLDGIVVFADDSNMHSMELFDEIQNVRWFG ALSVGILAHSGNADELSSVLKMDQEGKPIQGPSCDSSGKLVGWHVFNTQPYATKTAVYVDDKAAVMPSKMEWSGFVLNSRLLWKEPVDDRPTWVKDVDNL LDGNEEIEDGPLSMVKDPSMVETLGSCGRNVLLWWLRVE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 473 Download |
| MKLLSAFRSS YLNRRGTTFR SLDPSSFDGG FIPKPSPSSI FWLAIHCLCC LISLILGFRF 60 SHLVLFFLFS TSVTNLYTTT AGVSQLLKLK PLEKANVTAE SSRVVVGRHG IRIRPWPHPN 120 PIEVMRAHQL LERVQKEQKS LYGVRSPRAV IAVTPTYVRT FQALHLTGVM HSLMLVPYDV 180 VWIVVEAGGK TNETASFVGK SRLKTVHVGF DQKMPNTWED RRRVESKMRI QGLRIVREEK 240 LDGIVVFADD SNMHSMELFD EIQNVRWFGA LSVGILAHSG NADELSSVLK MDQEGKPIQG 300 PSCDSSGKLV GWHVFNTQPY ATKTAVYVDD KAAVMPSKME WSGFVLNSRL LWKEPVDDRP 360 TWVKDVDNLL DGNEEIEDGP LSMVKDPSMV ETLGSCGRNV LLWWLRVEAR ADSKFPPGWI 420 IKSPLEITVP SKRTPWPDSS SKLPVVTKEA KYNQPATEKR SGKAKRIKEQ EQ* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02458 | PLN02458 | 3.0e-15 | 119 | 365 | 253 | + transferase, transferring glycosyl groups | ||
| pfam03360 | Glyco_transf_43 | 2.0e-48 | 169 | 409 | 248 | + Glycosyltransferase family 43. | ||
| cd00218 | GlcAT-I | 9.0e-62 | 148 | 409 | 266 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAI93186.1 | 0 | 4 | 463 | 3 | 470 | glycosyltransferase [Gossypium raimondii] |
| EMBL | CAI94899.1 | 0 | 1 | 416 | 1 | 415 | glycosyltransferase [Brassica napus] |
| EMBL | CBI21374.1 | 0 | 4 | 463 | 3 | 443 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_201524.1 | 0 | 4 | 472 | 3 | 479 | glycosyl transferase family 43 protein [Arabidopsis thaliana] |
| RefSeq | XP_002283249.1 | 0 | 4 | 463 | 3 | 481 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v84_B | 0.000000002 | 153 | 351 | 8 | 184 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
| PDB | 1v84_A | 0.000000002 | 153 | 351 | 8 | 184 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
| PDB | 1v83_B | 0.000000002 | 153 | 351 | 8 | 184 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
| PDB | 1v83_A | 0.000000002 | 153 | 351 | 8 | 184 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
| PDB | 1v82_B | 0.000000002 | 153 | 351 | 8 | 184 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
