| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra012198 |
| Family | GH9 |
| Protein Properties | Length: 519 Molecular Weight: 56904.9 Isoelectric Point: 5.3205 |
| Chromosome | Chromosome/Scaffold: 07 Start: 9347433 End: 9349796 |
| Description | glycosyl hydrolase 9B5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 50 | 504 | 0 |
| KYADALKIAMQFFDIQKSGKLENNKIPWRGDSGLKDGSEASLDLSKGLYDAGDHMKFGFPMAFTATLLSWSILEYGNHMDSLDQLDPAKDSLKWTTDFLI NAHPSPNVLYIQVGDPETDHKCWDRPETMSRKRTLTKIDADTPGTEVAAETAAAMAAASLVFKESDTKYSGTLLKHAKQLFDFADNNRASYSVNIPEVQS YYNSTGYGDELLWAASWLYHATEDKTYLDFVSKNGDEFGNFGSPTWFSWDNKLPGTHVLLSRLTFFKKGLSGSKGLEGYKETAEAVMCGLIPDSPTATSS RTDGGLIWVAEWNALQHPVSSAFLATLYSDYMLTSGVDKLSCGDTSFKPSDLRKFARSQADYMLGKNPETMSYLVGYGDKYPEFVHHRGASIPGDANTGC KDGFKWLNSEEPNPNVAYGALVGGPFLNETFIDARNNSMQNEPSTYNSALVVGLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 519 Download |
| MVAKSGSRCC CCCWFLGIIV VIAVVLAVVF TIRHRANHSD DVAPGSTDKK YADALKIAMQ 60 FFDIQKSGKL ENNKIPWRGD SGLKDGSEAS LDLSKGLYDA GDHMKFGFPM AFTATLLSWS 120 ILEYGNHMDS LDQLDPAKDS LKWTTDFLIN AHPSPNVLYI QVGDPETDHK CWDRPETMSR 180 KRTLTKIDAD TPGTEVAAET AAAMAAASLV FKESDTKYSG TLLKHAKQLF DFADNNRASY 240 SVNIPEVQSY YNSTGYGDEL LWAASWLYHA TEDKTYLDFV SKNGDEFGNF GSPTWFSWDN 300 KLPGTHVLLS RLTFFKKGLS GSKGLEGYKE TAEAVMCGLI PDSPTATSSR TDGGLIWVAE 360 WNALQHPVSS AFLATLYSDY MLTSGVDKLS CGDTSFKPSD LRKFARSQAD YMLGKNPETM 420 SYLVGYGDKY PEFVHHRGAS IPGDANTGCK DGFKWLNSEE PNPNVAYGAL VGGPFLNETF 480 IDARNNSMQN EPSTYNSALV VGLLSSLVTR SSSVESFI* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00119 | PLN00119 | 2.0e-148 | 42 | 496 | 461 | + endoglucanase | ||
| PLN02171 | PLN02171 | 2.0e-152 | 51 | 496 | 454 | + endoglucanase | ||
| PLN02340 | PLN02340 | 2.0e-155 | 51 | 493 | 450 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 2.0e-162 | 51 | 495 | 450 | + Glycosyl hydrolase family 9. | ||
| PLN02345 | PLN02345 | 0 | 54 | 496 | 447 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM63477.1 | 0 | 46 | 517 | 53 | 524 | endo-beta-1,4-glucanase, putative [Arabidopsis thaliana] |
| RefSeq | NP_173423.1 | 0 | 1 | 517 | 1 | 515 | AtGH9B5 (Arabidopsis thaliana Glycosyl Hydrolase 9B5); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_177697.1 | 0 | 46 | 517 | 53 | 524 | AtGH9B7 (Arabidopsis thaliana glycosyl hydrolase 9B7); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002276739.1 | 0 | 35 | 517 | 34 | 524 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002510516.1 | 0 | 44 | 517 | 48 | 522 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 51 | 508 | 5 | 429 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 1ksc_A | 0 | 51 | 508 | 5 | 429 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 1ks8_A | 0 | 51 | 508 | 5 | 429 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 50 | 508 | 5 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 50 | 508 | 5 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
