| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra012349 |
| Family | GH9 |
| Protein Properties | Length: 484 Molecular Weight: 53498.7 Isoelectric Point: 9.6395 |
| Chromosome | Chromosome/Scaffold: 07 Start: 8308075 End: 8309766 |
| Description | cellulase 5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 24 | 476 | 0 |
| NYREALSKSLLFFQGQRSGRLPGDQKLSWRFNSGLSDGSSAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSSLEYGKKMGPELQNAREAIRWATDYLLK CARATPGKLYVGVGDPNGDHKCWERPEDMDTPRTVYSVSPSNPGSDVAAETAAALAASSMVFRKVDPKYSRLLLATAKKVMQFAIQYRGAYSDSLSSAVC PFYCSYSGYKDELLWGGAWLLRATNNQYYLNFIKSLGGGDQPDIFSWDNKYAGAYVLLSRRAVLNKDNNFEVYKQAAENFMCKILPNTPSSSTKYTKGGL MYKLPQSNLQYVTSITFLLTTYAKYMKSTKQTFNCGNSFIAPNALINLSKLQVDYILGVNPMKMSYMVGFGSSFPKRIHHRGSSLPSRAVRSNSLGCSGG FQSFRTQNPNPNILAGAIVGGPDRNDQYPDQRDDYSRSEPATYINAAFVGPLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 484 Download |
| MASPFLFVFL LSGLLVRNTY AGPNYREALS KSLLFFQGQR SGRLPGDQKL SWRFNSGLSD 60 GSSAHVDLTG GYYDAGDNVK FNFPMAFTTT MLSWSSLEYG KKMGPELQNA REAIRWATDY 120 LLKCARATPG KLYVGVGDPN GDHKCWERPE DMDTPRTVYS VSPSNPGSDV AAETAAALAA 180 SSMVFRKVDP KYSRLLLATA KKVMQFAIQY RGAYSDSLSS AVCPFYCSYS GYKDELLWGG 240 AWLLRATNNQ YYLNFIKSLG GGDQPDIFSW DNKYAGAYVL LSRRAVLNKD NNFEVYKQAA 300 ENFMCKILPN TPSSSTKYTK GGLMYKLPQS NLQYVTSITF LLTTYAKYMK STKQTFNCGN 360 SFIAPNALIN LSKLQVDYIL GVNPMKMSYM VGFGSSFPKR IHHRGSSLPS RAVRSNSLGC 420 SGGFQSFRTQ NPNPNILAGA IVGGPDRNDQ YPDQRDDYSR SEPATYINAA FVGPLAYFVG 480 KSH* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02175 | PLN02175 | 0 | 1 | 478 | 478 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 20 | 478 | 463 | + endoglucanase | ||
| PLN02308 | PLN02308 | 0 | 19 | 478 | 464 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 24 | 476 | 464 | + Glycosyl hydrolase family 9. | ||
| PLN03009 | PLN03009 | 0 | 24 | 479 | 463 | + cellulase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAB65156.1 | 0 | 16 | 480 | 19 | 484 | basic cellulase [Citrus sinensis] |
| GenBank | AAM63253.1 | 0 | 1 | 480 | 1 | 480 | putative beta-glucanase [Arabidopsis thaliana] |
| RefSeq | NP_001031082.1 | 0 | 85 | 480 | 1 | 396 | CEL5 (CELLULASE 5); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_173701.1 | 0 | 1 | 480 | 1 | 480 | CEL5 (CELLULASE 5); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_177294.1 | 0 | 1 | 480 | 1 | 480 | ATCEL3 (ARABIDOPSIS THALIANA CELLULASE 3); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 24 | 479 | 4 | 429 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 1ksc_A | 0 | 24 | 479 | 4 | 429 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 1ks8_A | 0 | 24 | 479 | 4 | 429 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 24 | 479 | 5 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 24 | 479 | 5 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
