Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra012408 |
Family | GT31 |
Protein Properties | Length: 549 Molecular Weight: 62369.5 Isoelectric Point: 8.2611 |
Chromosome | Chromosome/Scaffold: 07 Start: 7871746 End: 7873906 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 315 | 496 | 0 |
ERMAVRKSWMQQKLVRSSKVVARFFVALHARKEVNVDLKKEAEYFGDIVIVPYMDHYDLVVLKTVAICEYGVSTVAAKYIMKCDDDTFVRVDAVIQEAEK VKGRGSLYIGNINFYHKPLRTGKWAVTYEEWPEEYYPPYANGPGYILSYDIAKFIVDDFEQQRLRLFKMEDVSMGMWAEKFN |
Full Sequence |
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Protein Sequence Length: 549 Download |
MKKSKLDNSA SHTRFGLVQF LLALLLFYFL CMSFEIPFIF RTGSGSDDGL PRHMVVVGRE 60 ANRAIVGEEE DPHRPFEDPG RVNRAGHIHR EFKTVSEIFT NESFFDAGGF SDELSTFHET 120 VKHAISTGRK MWGNLGSGLI TKPNPVKNRT EKCPDTVSVT GSEFSNRSRI LVLPCGLTLG 180 SHVTVVATPH WAHAEKGDDG RKKITHDWPY PFEEGKLFVL TLRAGMEGYH ISVNGRHITS 240 FPYRTGFVLE DATGLAVKGN IDVHSVYASS LPSTNPSFAP QKHLEMQSRW KAPSLPQKPV 300 ELFIGILSAG NHFGERMAVR KSWMQQKLVR SSKVVARFFV ALHARKEVNV DLKKEAEYFG 360 DIVIVPYMDH YDLVVLKTVA ICEYGVSTVA AKYIMKCDDD TFVRVDAVIQ EAEKVKGRGS 420 LYIGNINFYH KPLRTGKWAV TYEEWPEEYY PPYANGPGYI LSYDIAKFIV DDFEQQRLRL 480 FKMEDVSMGM WAEKFNETRP VEVVPSLRFC QFGCIEDYFT AHYQSPRQMI CMWDKLQRLG 540 KPHCCNMR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03133 | PLN03133 | 0.003 | 147 | 189 | 44 | + beta-1,3-galactosyltransferase; Provisional | ||
cd00070 | GLECT | 1.0e-13 | 173 | 266 | 123 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
pfam00337 | Gal-bind_lectin | 6.0e-16 | 171 | 266 | 127 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
pfam01762 | Galactosyl_T | 2.0e-21 | 316 | 494 | 196 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03133 | PLN03133 | 8.0e-99 | 201 | 548 | 357 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF79857.1 | 0 | 201 | 548 | 326 | 657 | AC000348_10 T7N9.18 [Arabidopsis thaliana] |
DDBJ | BAC42872.1 | 0 | 1 | 199 | 1 | 215 | unknown protein [Arabidopsis thaliana] |
DDBJ | BAC42872.1 | 0 | 201 | 548 | 326 | 673 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_174032.2 | 0 | 1 | 199 | 1 | 215 | galactosyltransferase family protein [Arabidopsis thaliana] |
RefSeq | NP_174032.2 | 0 | 201 | 548 | 326 | 673 | galactosyltransferase family protein [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x50_A | 0.001 | 202 | 274 | 96 | 163 | A Chain A, Solution Structure Of The C-Terminal Gal-Bind Lectin Domain From Human Galectin-4 |
PDB | 4fqz_A | 0.002 | 200 | 350 | 87 | 210 | A Chain A, Crystal Structure Of A Protease-Resistant Mutant Form Of Human Galectin-8 |
PDB | 3vkm_B | 0.002 | 200 | 350 | 87 | 210 | A Chain A, Crystal Structure Of A Protease-Resistant Mutant Form Of Human Galectin-8 |
PDB | 3vkm_A | 0.002 | 200 | 350 | 87 | 210 | A Chain A, Crystal Structure Of A Protease-Resistant Mutant Form Of Human Galectin-8 |
PDB | 3vkl_B | 0.002 | 200 | 350 | 87 | 210 | A Chain A, Crystal Structure Of A Protease-Resistant Mutant Form Of Human Galectin-8 |