| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra013178 |
| Family | GT16 |
| Protein Properties | Length: 421 Molecular Weight: 48103.8 Isoelectric Point: 8.666 |
| Chromosome | Chromosome/Scaffold: 03 Start: 20027026 End: 20028288 |
| Description | beta-1,2-N-acetylglucosaminyltransferase II |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT16 | 70 | 404 | 0 |
| LHRRNSFPPRNLDLYPNLGKDRVVIVLYVHNRPQYLRVTVESLSKVEGISETLLIVSHDGYFEEMNKIVESIKFCQVKQIFSPYSPHIFRGSFPGTTAKD CKSKGDKDCEGHPDQYGNHRSPKIVSLKHHWWWMMNTVWDGLEESRDHDGHVLFIEEDHFLFPNAYRNIQTLARVKRVKCPDCFAANLAPSDVKSKGEGF DSLVAERMGNVGYSFNRSVWEKIRHKAREFCFFDDYNWDITMWATVFPSFGSPVYTLRGPRTSAVHFGKCGLHQGRGGEGDCMDNGVVNIEVKETDKVVN VKEEWGVRVFEHQPGYKAGFKGWGGWGDERDRRLC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 421 Download |
| METPWKKQRL KDTALCRLGI LFAVTVSLVL MLVSVPRTAL NNPFSDIDFA PNRNVSLLSV 60 ARGNPISVRL HRRNSFPPRN LDLYPNLGKD RVVIVLYVHN RPQYLRVTVE SLSKVEGISE 120 TLLIVSHDGY FEEMNKIVES IKFCQVKQIF SPYSPHIFRG SFPGTTAKDC KSKGDKDCEG 180 HPDQYGNHRS PKIVSLKHHW WWMMNTVWDG LEESRDHDGH VLFIEEDHFL FPNAYRNIQT 240 LARVKRVKCP DCFAANLAPS DVKSKGEGFD SLVAERMGNV GYSFNRSVWE KIRHKAREFC 300 FFDDYNWDIT MWATVFPSFG SPVYTLRGPR TSAVHFGKCG LHQGRGGEGD CMDNGVVNIE 360 VKETDKVVNV KEEWGVRVFE HQPGYKAGFK GWGGWGDERD RRLCLDFATM YRFTSRDASP 420 * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam05060 | MGAT2 | 5.0e-172 | 67 | 404 | 364 | + N-acetylglucosaminyltransferase II (MGAT2). UDP-N-acetyl-D-glucosamine:alpha-6-D-mannoside beta-1,2-N- acetylglucosaminyltransferase II (EC 2.4.1.143) (GnT II/MGAT2) is a Golgi resident enzyme that catalyzes an essential step in the biosynthetic pathway leading from high mannose to complex N-linked oligosaccharides. Mutations in the MGAT2 gene lead to congenital disorder of glycosylation (CDG IIa). CDG IIa patients have an increased bleeding tendency, unrelated to coagulation factors. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005795 | Golgi stack |
| GO:0008455 | alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity |
| GO:0009312 | oligosaccharide biosynthetic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD29068.1 | 0 | 54 | 420 | 50 | 419 | putative N-acetylglucosaminyltransferase [Arabidopsis thaliana] |
| EMBL | CAI72505.1 | 0 | 66 | 418 | 78 | 433 | beta 1,2 N-acetylglucosaminyltransferase [Populus alba x Populus tremula] |
| RefSeq | NP_178601.2 | 0 | 1 | 420 | 1 | 430 | beta-1,2-N-acetylglucosaminyltransferase II [Arabidopsis thaliana] |
| RefSeq | XP_002321199.1 | 0 | 44 | 418 | 63 | 433 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530215.1 | 0 | 48 | 415 | 55 | 429 | beta-1,2-n-acetylglucosaminyltransferase II, putative [Ricinus communis] |
