CAZyme Information

Basic Information
SpeciesBrassica rapa
Cazyme IDBra013399
FamilyGT4
Protein PropertiesLength: 495 Molecular Weight: 55195.2 Isoelectric Point: 9.1888
ChromosomeChromosome/Scaffold: 01 Start: 5434038 End: 5435522
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT43084455.3e-26
  ENSSAIVLGAAGRLVKDKGHPILYEAFAKLIETHSNVHLVVAGSGPWENRYKELGEKVTILGSLNPNELKGFYNGIDLFVNPTLRPQGLDLTLMEAMLSG
  KPVMASRYASIKRSIVVNDEFGFMFAPNVEALTAVMEV
Full Sequence
Protein Sequence     Length: 495     Download
MASQTKLKKP NSHFSLCTFL FFTVLFTIPA LFLLRTSSSC SSSTTAAVSP SSDTNQPPWS    60
GDLQTAQFAW NRLSFSLTNP PPKTLRLAVF SRKWPTGPNP GGMERHAFTL YTALARRGHH    120
VHVFTSPLDP SPQTNKITSA SDKTINPTIH SHGDAEPGKW RYNKAWELYQ EENKKEPFDV    180
VHTESVALPH WIAREVPNLA VSWHGIALES LQSSIYQDLI RKPGEPRSQG FNASLYGAVL    240
PKILDEIRFF HNYAHHIAIS DSCGEMLRDV YQIPEKRVHV ILNGVDENGF KSDKKLRSLF    300
RSKLGLQENS SAIVLGAAGR LVKDKGHPIL YEAFAKLIET HSNVHLVVAG SGPWENRYKE    360
LGEKVTILGS LNPNELKGFY NGIDLFVNPT LRPQGLDLTL MEAMLSGKPV MASRYASIKR    420
SIVVNDEFGF MFAPNVEALT AVMEVAVAEG AERLAERGRK CKEYAAEMFT ASKMALAYER    480
LFLCIKDQRF CIYP* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd03807GT1_WbnK_like3.0e-3396482402+
cd03811GT1_WabH_like2.0e-36101471382+
TIGR00032argG4.0e-4098481402+
cd03798GT1_wlbH_like9.0e-4598482404+
cd03801GT1_YqgM_like1.0e-6586482409+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAM65716.1014941493unknown [Arabidopsis thaliana]
EMBLCAA16923.2014761475putative protein [Arabidopsis thaliana]
RefSeqNP_567589.10149424516glycosyl transferase family 1 protein [Arabidopsis thaliana]
RefSeqXP_002303479.1014931488predicted protein [Populus trichocarpa]
RefSeqXP_002519899.1014942486glycosyltransferase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3okp_A0.000001283412170308A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1
PDB3okc_A0.000001283412170308A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form)
PDB3oka_B0.000001283412170308A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form)
PDB3oka_A0.000001283412170308A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form)
PDB2gek_A0.00000510044334343A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form)
Transmembrane Domains
StartEnd
1234
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
FY44075429112910
DY01740726212620
FG5599982302584870
DK5196382282684950
CD8243262111833930
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_055_00071.1Aquca_004_00554.1
Arabidopsis lyrata316266919149492915
Arabidopsis thalianaAT1G73160.1AT5G59070.1AT4G19460.1
Brachypodium distachyonBradi2g45370.1
Brassica rapaBra012542Bra003857Bra020331
Carica papayaevm.model.supercontig_305.3
Capsella rubellaCarubv10004612mCarubv10021524m
Citrus clementinaCiclev10008126mCiclev10003490m
Citrus sinensisorange1.1g039338morange1.1g044542m
Cucumis sativusCucsa.268510.1
Eucalyptus grandisEucgr.E01172.1Eucgr.F03250.1
Fragaria vescamrna27708.1-v1.0-hybridmrna27178.1-v1.0-hybrid
Glycine maxGlyma09g34990.1Glyma01g35440.1Glyma16g17250.1Glyma16g08210.1
Gossypium raimondiiGorai.009G372800.1Gorai.008G217900.1
Linum usitatissimumLus10032187Lus10014499Lus10033297Lus10034760
Malus domesticaMDP0000252217MDP0000510770MDP0000280727MDP0000690085
Manihot esculentacassava4.1_023608mcassava4.1_022788m
Medicago truncatulaMedtr5g026360.1Medtr8g071900.1
Mimulus guttatusmgv1a005617mmgv1a027119m
Oryza sativaLOC_Os01g46430.1
Panicum virgatumPavirv00039421mPavirv00050283m
Physcomitrella patensPp1s115_97V6.1Pp1s115_97V6.2Pp1s231_59V6.1
Phaseolus vulgarisPhvul.002G124600.1Phvul.003G277200.1
Picea abiesMA_159118g0690MA_58772g0010
Populus trichocarpaPotri.011G097000.1Potri.003G105500.1Potri.001G128300.1
Prunus persicappa004871mppa024212m
Ricinus communis30150.m00047029827.m002616
Setaria italicaSi001150m
Selaginella moellendorffii79637
Sorghum bicolorSb03g029770.1
Thellungiella halophilaThhalv10013459mThhalv10027268mThhalv10019571m
Vitis viniferaGSVIVT01036920001GSVIVT01036921001GSVIVT01036924001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny