| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra013582 |
| Family | AA1 |
| Protein Properties | Length: 542 Molecular Weight: 60652.1 Isoelectric Point: 10.3452 |
| Chromosome | Chromosome/Scaffold: 01 Start: 6451635 End: 6455254 |
| Description | SKU5 similar 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 43 | 496 | 0 |
| KQQGILINGQFPGPHIDAVTNDNIIISVFNYLREPFLISWNGVQQRKNSYQDGVIGTTCPIPPGKNFTYIIQVKDQIGSFYYFPSLAFHKAAGAFGAIRV WSRPRIPVPFPSPDGDFWLLAGDWYKTNHYVLRRLLEAGRNVPFPDGVLINGRGWGGNTFTVQPGKTYRFRISNVGTATTLNFRIQGHTMKLVEVEGSHT IQNVYTSLDVHLGQSYSVLVTANQAPQDYYIVVSSRFTRRVLTTTSILHYSNSRRGVSGPAPSGPTLNIASSLFQARTIKRNLTASGPRPNPQGSYHYGL IKPARTIMLANSAPWINGKQRYAVNGASFVAPDTPLKLADYFKIPGVFNLGSIPTNPPGGNGGYLTTSVMGANFREFIEIVFQNWENSVQSWHISGYSFF VVGVDGGKWTQGSRSKYTLRDAVSRSTVQVYPRAWTAIYIALDNVGMWNIRSEN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 542 Download |
| MRHSCKVSIV LLLVLINGVF GDNPYRFFTW KITYGDIYPL GVKQQGILIN GQFPGPHIDA 60 VTNDNIIISV FNYLREPFLI SWNGVQQRKN SYQDGVIGTT CPIPPGKNFT YIIQVKDQIG 120 SFYYFPSLAF HKAAGAFGAI RVWSRPRIPV PFPSPDGDFW LLAGDWYKTN HYVLRRLLEA 180 GRNVPFPDGV LINGRGWGGN TFTVQPGKTY RFRISNVGTA TTLNFRIQGH TMKLVEVEGS 240 HTIQNVYTSL DVHLGQSYSV LVTANQAPQD YYIVVSSRFT RRVLTTTSIL HYSNSRRGVS 300 GPAPSGPTLN IASSLFQART IKRNLTASGP RPNPQGSYHY GLIKPARTIM LANSAPWING 360 KQRYAVNGAS FVAPDTPLKL ADYFKIPGVF NLGSIPTNPP GGNGGYLTTS VMGANFREFI 420 EIVFQNWENS VQSWHISGYS FFVVGVDGGK WTQGSRSKYT LRDAVSRSTV QVYPRAWTAI 480 YIALDNVGMW NIRSENWARQ YLGQQFYLRV YTSSTSYRDE YPPPKNALMC GRARGRHTRP 540 F* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02991 | PLN02991 | 0 | 9 | 538 | 530 | + oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 1 | 538 | 538 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 9 | 538 | 532 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 6 | 535 | 540 | + copper ion binding / oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 1 | 534 | 550 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95805.1 | 0 | 2 | 541 | 5 | 544 | unknown [Populus trichocarpa] |
| RefSeq | NP_193932.1 | 0 | 1 | 541 | 1 | 541 | sks4 (SKU5 Similar 4); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002272880.1 | 0 | 1 | 541 | 1 | 540 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002332613.1 | 0 | 2 | 541 | 5 | 544 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518462.1 | 0 | 16 | 541 | 17 | 541 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 26 | 503 | 4 | 516 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 1asq_A | 0 | 26 | 503 | 4 | 516 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 1asp_B | 0 | 26 | 503 | 4 | 516 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 1asp_A | 0 | 26 | 503 | 4 | 516 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 1aso_B | 0 | 26 | 503 | 4 | 516 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
