| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra013709 |
| Family | GH9 |
| Protein Properties | Length: 481 Molecular Weight: 52838.9 Isoelectric Point: 5.2394 |
| Chromosome | Chromosome/Scaffold: 01 Start: 7309588 End: 7312069 |
| Description | glycosyl hydrolase 9B15 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 23 | 472 | 0 |
| DYGDALNKSILFFEGQRSGKLPVNQRVTWRADSALSDGKPDNVNLIGGYYDAGDNVKFVWPMSFTTTLLSWAAIEYQNEISSLNQLSYLRSSIKWATDFI ILAHASPTTLYTQVGDGNSDHSCWERPEDMDTARTLYKINSSSPGSEAAGEAAAALSSAALVFKTVDSNYSSKLLSHAKSLFEFADQYRGSYQASCPFYC SYSGYQDELLWAAAWLYKATGENKYISYVISNQDWSQAVNEFSWDNKFAGAQALLASEFYKGKNDLGKFKNDVESFVCALMPGSSSQQIEPTPGGLLFTR DSSNLQYVTTAITVLFHYSKTITQARIGSIQCGSTQFTVSQIQNFAKSQVDYILGNNPMKMSYMVGYGNKYPTQPHHRGSSLPSIKSKPEKIDCNGGYSY YNSDQPNPNVHTGAIVGGPDSSDQFSDERSDYSHAEPTTYINAAFIGPVA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 481 Download |
| MGKLLVIMLV CIFMAFQSLE ALDYGDALNK SILFFEGQRS GKLPVNQRVT WRADSALSDG 60 KPDNVNLIGG YYDAGDNVKF VWPMSFTTTL LSWAAIEYQN EISSLNQLSY LRSSIKWATD 120 FIILAHASPT TLYTQVGDGN SDHSCWERPE DMDTARTLYK INSSSPGSEA AGEAAAALSS 180 AALVFKTVDS NYSSKLLSHA KSLFEFADQY RGSYQASCPF YCSYSGYQDE LLWAAAWLYK 240 ATGENKYISY VISNQDWSQA VNEFSWDNKF AGAQALLASE FYKGKNDLGK FKNDVESFVC 300 ALMPGSSSQQ IEPTPGGLLF TRDSSNLQYV TTAITVLFHY SKTITQARIG SIQCGSTQFT 360 VSQIQNFAKS QVDYILGNNP MKMSYMVGYG NKYPTQPHHR GSSLPSIKSK PEKIDCNGGY 420 SYYNSDQPNP NVHTGAIVGG PDSSDQFSDE RSDYSHAEPT TYINAAFIGP VAALIGLNSN 480 * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02171 | PLN02171 | 6.0e-173 | 4 | 476 | 489 | + endoglucanase | ||
| PLN02308 | PLN02308 | 7.0e-179 | 6 | 472 | 476 | + endoglucanase | ||
| PLN02613 | PLN02613 | 0 | 1 | 479 | 483 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 23 | 472 | 463 | + Glycosyl hydrolase family 9. | ||
| PLN02266 | PLN02266 | 0 | 23 | 474 | 461 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC78504.1 | 0 | 23 | 475 | 40 | 493 | cellulase [Phaseolus vulgaris] |
| GenBank | ACC91269.1 | 0 | 1 | 475 | 1 | 475 | glycosyl hydrolase family 9 protein [Capsella rubella] |
| RefSeq | NP_194087.1 | 0 | 1 | 475 | 1 | 475 | AtGH9B15 (Arabidopsis thaliana glycosyl hydrolase 9B15); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_849349.1 | 0 | 1 | 475 | 1 | 475 | AtGH9B14 (Arabidopsis thaliana glycosyl hydrolase 9B14); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| Swiss-Prot | Q9SZ90 | 0 | 1 | 475 | 1 | 477 | GUN18_ARATH RecName: Full=Endoglucanase 18; AltName: Full=Endo-1,4-beta glucanase 18; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 21 | 477 | 2 | 431 | A Chain A, Crystal Structure Of A Possible 3-Hydroxyisobutyrate Dehydrogenase From Pseudomonas Aeruginosa Pao1 |
| PDB | 1ksc_A | 0 | 21 | 477 | 2 | 431 | A Chain A, Crystal Structure Of A Possible 3-Hydroxyisobutyrate Dehydrogenase From Pseudomonas Aeruginosa Pao1 |
| PDB | 1ks8_A | 0 | 21 | 477 | 2 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 21 | 475 | 3 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 21 | 475 | 3 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
