| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra013756 |
| Family | GH37 |
| Protein Properties | Length: 564 Molecular Weight: 63770.8 Isoelectric Point: 5.062 |
| Chromosome | Chromosome/Scaffold: 01 Start: 7606515 End: 7609292 |
| Description | trehalase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH37 | 39 | 552 | 0 |
| DPKFYIDLSLKLPHDLSTAESAFDDLTTGSRDLSVPVEKLEKFVHEYFDDAGKDLVHHEPEDFVSDPTEFLLNVENDQVREWAREVHCLWRTLSCRVSDS VIESPDRHTLLPLPEPVIIPGSRFREVYYWDSYWVIKGLLTSKMFTTAKGLVTNLMSLVETYGYALNGARAYYTNRSQPPLLSSMVYEIYNVTKDEELVR KAIPVLLKEYEFWNSGKHKVVIRDASGNDHILSRYYAMWNMPRPESSVFDQESASGFSSTLEKQRFHRDIATAAESGCDFSTRWMRHPPNFTTMATTSVV PVDLNVFLLKMELDIAFMMEIAGDRKGSERFVKASEARKKAFETVFWNEKAAQWLDYWLSSNGDEPETWKAENQNNNVFASNFAPIWISSFHSDENLVKK VVKALANSGLIAPAGIVTSLTNSGQQWDAPNGWAPQQELIVTGLARSGLKEANELAEEIARRWIRSSYRVYKTSGFIHEKLNVSEFGAYGGGGEYKPQTG FGWSNGVILAFLEE | |||
| Full Sequence |
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| Protein Sequence Length: 564 Download |
| MAVSDSDSDS GPVVQTTPLV TFLQRVQLTA LRSYSKKPDP KFYIDLSLKL PHDLSTAESA 60 FDDLTTGSRD LSVPVEKLEK FVHEYFDDAG KDLVHHEPED FVSDPTEFLL NVENDQVREW 120 AREVHCLWRT LSCRVSDSVI ESPDRHTLLP LPEPVIIPGS RFREVYYWDS YWVIKGLLTS 180 KMFTTAKGLV TNLMSLVETY GYALNGARAY YTNRSQPPLL SSMVYEIYNV TKDEELVRKA 240 IPVLLKEYEF WNSGKHKVVI RDASGNDHIL SRYYAMWNMP RPESSVFDQE SASGFSSTLE 300 KQRFHRDIAT AAESGCDFST RWMRHPPNFT TMATTSVVPV DLNVFLLKME LDIAFMMEIA 360 GDRKGSERFV KASEARKKAF ETVFWNEKAA QWLDYWLSSN GDEPETWKAE NQNNNVFASN 420 FAPIWISSFH SDENLVKKVV KALANSGLIA PAGIVTSLTN SGQQWDAPNG WAPQQELIVT 480 GLARSGLKEA NELAEEIARR WIRSSYRVYK TSGFIHEKLN VSEFGAYGGG GEYKPQTGFG 540 WSNGVILAFL EEFGWPSDLS IEP* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13270 | treF | 2.0e-81 | 78 | 556 | 499 | + trehalase; Provisional | ||
| PRK13271 | treA | 3.0e-89 | 127 | 551 | 433 | + trehalase; Provisional | ||
| COG1626 | TreA | 7.0e-92 | 143 | 554 | 425 | + Neutral trehalase [Carbohydrate transport and metabolism] | ||
| PLN02567 | PLN02567 | 0 | 13 | 563 | 556 | + alpha,alpha-trehalase | ||
| pfam01204 | Trehalase | 0 | 38 | 554 | 528 | + Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004555 | alpha,alpha-trehalase activity |
| GO:0005991 | trehalose metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAB63620.1 | 0 | 1 | 562 | 1 | 556 | trehalase precusor isolog [Arabidopsis thaliana] |
| GenBank | AAF22127.1 | 0 | 1 | 562 | 1 | 565 | AF126425_1 trehalase [Arabidopsis thaliana] |
| RefSeq | NP_194135.1 | 0 | 1 | 562 | 62 | 625 | TRE1 (TREHALASE 1); alpha,alpha-trehalase/ trehalase [Arabidopsis thaliana] |
| RefSeq | XP_002303674.1 | 0 | 2 | 561 | 6 | 566 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303675.1 | 0 | 2 | 561 | 6 | 566 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wyn_D | 0 | 147 | 551 | 108 | 500 | A Chain A, Crystal Structure Of A Possible 3-Hydroxyisobutyrate Dehydrogenase From Pseudomonas Aeruginosa Pao1 |
| PDB | 2wyn_C | 0 | 147 | 551 | 108 | 500 | A Chain A, Crystal Structure Of A Possible 3-Hydroxyisobutyrate Dehydrogenase From Pseudomonas Aeruginosa Pao1 |
| PDB | 2wyn_B | 0 | 147 | 551 | 108 | 500 | A Chain A, Crystal Structure Of A Possible 3-Hydroxyisobutyrate Dehydrogenase From Pseudomonas Aeruginosa Pao1 |
| PDB | 2wyn_A | 0 | 147 | 551 | 108 | 500 | A Chain A, Crystal Structure Of A Possible 3-Hydroxyisobutyrate Dehydrogenase From Pseudomonas Aeruginosa Pao1 |
| PDB | 2jjb_D | 0 | 147 | 551 | 108 | 500 | A Chain A, Crystal Structure Of A Possible 3-Hydroxyisobutyrate Dehydrogenase From Pseudomonas Aeruginosa Pao1 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| trehalose degradation II (trehalase) | TREHALA-RXN | EC-3.2.1.28 | α,α-trehalase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| ES905631 | 280 | 173 | 452 | 0 |
| GR445248 | 269 | 80 | 348 | 0 |
| EL588765 | 294 | 43 | 336 | 0 |
| GR447802 | 232 | 171 | 402 | 0 |
| EY933482 | 232 | 132 | 363 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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