y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra013781 |
Family | GH9 |
Protein Properties | Length: 611 Molecular Weight: 68723.9 Isoelectric Point: 7.6664 |
Chromosome | Chromosome/Scaffold: 01 Start: 7731559 End: 7734152 |
Description | glycosyl hydrolase 9A3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 108 | 573 | 0 |
NYTVALRKALMFFNAQKSGKLPEHNNVTWRGDSCLQDGKDQTGGFYKDLVGGYYDAGDATKFNFPMSYAMTMLSWSVIEYSAKYKAAGELDHVKELIKWG ADYFLKTFNSSADTIDVMVEQVGSGHDDHYCWMRPEDIDYERIVTPCYGSCSHLGAEMAAALASASIVFKDNRVYSQKLVHGAKTLYKYADFVKDKNSKN QSREFYKSSLFWDELLWGGAWLYYATGNVTYLDHVTSHDMARKAGAFWNSPDYGVSSWDNKLPGAQLLLTRLRLFMSPGYPYEDILSTFHNQTGVVMCSY LPYFTRFYRTKGGLIQLNHGEPQPLQYAANAAFLAALYSDYLDAADTPGWYCGPDFYSTKVLRDFARSQIDYILGKNPQNMSYVVDFGQRYPRHVHHKGA SIPKSVKKESCKGGWKWRDTKRDNPNIIVGAMVAGPDKHDGFHDLRSNYNYTEPTLAGNAGLVAAL |
Full Sequence |
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Protein Sequence Length: 611 Download |
MYGRHPLTVP LEINAADSIT DDDRSRKLQE HDRATLPPPL DATRRSWLLE PPQPKKKKYV 60 DLGCMLVSRK IFLWTLGTVL VTTLLAGSIT MIVRHMPHHK QTEPEPENYT VALRKALMFF 120 NAQKSGKLPE HNNVTWRGDS CLQDGKDQTG GFYKDLVGGY YDAGDATKFN FPMSYAMTML 180 SWSVIEYSAK YKAAGELDHV KELIKWGADY FLKTFNSSAD TIDVMVEQVG SGHDDHYCWM 240 RPEDIDYERI VTPCYGSCSH LGAEMAAALA SASIVFKDNR VYSQKLVHGA KTLYKYADFV 300 KDKNSKNQSR EFYKSSLFWD ELLWGGAWLY YATGNVTYLD HVTSHDMARK AGAFWNSPDY 360 GVSSWDNKLP GAQLLLTRLR LFMSPGYPYE DILSTFHNQT GVVMCSYLPY FTRFYRTKGG 420 LIQLNHGEPQ PLQYAANAAF LAALYSDYLD AADTPGWYCG PDFYSTKVLR DFARSQIDYI 480 LGKNPQNMSY VVDFGQRYPR HVHHKGASIP KSVKKESCKG GWKWRDTKRD NPNIIVGAMV 540 AGPDKHDGFH DLRSNYNYTE PTLAGNAGLV AALVALSGEE TLESIDKNTI FSAVPPLTPA 600 TPPPPAPWTP * 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02171 | PLN02171 | 2.0e-99 | 108 | 562 | 468 | + endoglucanase | ||
PLN02340 | PLN02340 | 3.0e-101 | 103 | 562 | 471 | + endoglucanase | ||
PLN02613 | PLN02613 | 1.0e-104 | 105 | 562 | 470 | + endoglucanase | ||
PLN02345 | PLN02345 | 2.0e-119 | 112 | 562 | 460 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 1.0e-147 | 108 | 562 | 464 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC49704.1 | 0 | 1 | 594 | 1 | 601 | endo-1,4-beta-glucanase [Solanum lycopersicum] |
GenBank | AAN72232.1 | 0 | 1 | 594 | 1 | 605 | At5g49720/K2I5_8 [Arabidopsis thaliana] |
EMBL | CAB51903.1 | 0 | 1 | 594 | 1 | 605 | cellulase; endo-1,4-beta-D-glucanase [Brassica napus] |
RefSeq | NP_194157.1 | 0 | 1 | 598 | 1 | 608 | ATGH9A3 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A3); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_199783.1 | 0 | 1 | 594 | 1 | 605 | ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 108 | 576 | 4 | 428 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 1ksc_A | 0 | 108 | 576 | 4 | 428 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 1ks8_A | 0 | 108 | 576 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 108 | 579 | 25 | 465 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 108 | 579 | 5 | 443 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |