| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra013803 |
| Family | CBM45 |
| Protein Properties | Length: 1280 Molecular Weight: 144387 Isoelectric Point: 8.5541 |
| Chromosome | Chromosome/Scaffold: 01 Start: 7826949 End: 7833542 |
| Description | phosphoglucan, water dikinase |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM45 | 286 | 364 | 5.1e-22 |
| LHWGVAKSSAGEWLTPPPDVLPEKSKIVHGACQTYFTDMSSREHSYQLIDINFKRSGFVGIQFVIWSGSHWVNNNGANF | |||
| Full Sequence |
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| Protein Sequence Length: 1280 Download |
| MATSKSHSFQ LIEGMELLIT VTGLPNGSSV RTEFHLKNCN RTWILHWGCI YQGNNNWFVP 60 SEHSTKQGAL QTPFVKSGND YVVILELRDP KVRAVEFVLK DGNRNRWLKQ HTGNFRVEIP 120 WNELHAHHRI PKNLIERRAY TIWDRKGRPQ NTAREQQMDY ENALRELQAD LARGISIDDL 180 QANSSIPVEK AVTSEPKQTM NLHQPSHRRK HDVQKWLQKY AEPITKNASV NSSALAELLK 240 KSVGQENVIS QKSFHVRNYE IAVLQKNVNG DCRLYVATNM AGPTVLHWGV AKSSAGEWLT 300 PPPDVLPEKS KIVHGACQTY FTDMSSREHS YQLIDINFKR SGFVGIQFVI WSGSHWVNNN 360 GANFAVNLKS LNSTSVKLGV DGKYILKWLL DEIAEREKEA ERSLMHRFNI ATELTERCKD 420 EGEGGCIGIM VWMKFMATRH LTWNKNYNVK PREISEALER FTNLMEKIYL QKPYKREIVR 480 LTMALVGRGG QGDVGQRIRD EILVIQRNNH CKSGMMEEWH QKLHNNSSAD DVIICEALLN 540 YVRSDFRIDA YWNTLKANGI TKERLASYDR PIVSEPRFKS DAKEGLIRDL TMYLKTLKAV 600 HSGADLESAI DTFLSPSKGH NVFALNGLSP KLQDLLSSIK RLVREENTAS LIEKLVDARI 660 ELHPALRAPR ARAKDLLFLD IALESCFKTT IEKRLISLNF NNPPEVVFVI CVVLENLCLS 720 TFNNEEDCYR VSETYKAHDV EWALQTKAVL DRLQLVLADR CQHYLRLIQP SANYLGQMLR 780 VDKHGIDVFT EEVVRAGPGA VLSTLVNRFD PCLRKIANLG CWQVISSADA YGFLVCVNEL 840 ITVQSKVYSK PTVIIACKVT GEEEIPDGVV AVLTPSLIDV LSHVSIRARN SKACTIICFA 900 TCFDQNVLKN LKSKEGREIS IHINSTGLVI SDGNNSDGHV RHIYISSVSH GVISKRKKFC 960 SNYVISSKEF TSEMVGSKSC NIKFLRERVP AWIKIPTSVA LPFGTFECAL SDDSNKDVAH 1020 KISALKVSLN RGDMTKLKAI QEAVLQMNAP MALRNELIHK LRNERMSYHG DESSWNRSWM 1080 AIKKVWASKW NERAYVSCKK TRVDHDAVCM AVLVQEVICG DYAFVIHTNN PVTGDPSEIY 1140 TEIVKGLGET LVGGYPGRAM SFITKKTNLK SPTVISYPSK RIGLYSKPSV IFRSDSNNED 1200 LEGYAGAGLY DSVIMDEAEE VVVDYSREQL IVDKAFQVRL FSAIAEAGHV IETLYGCPQD 1260 IEGVVKGGII YVVQDRPQL* 1320 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02784 | PLN02784 | 5.0e-12 | 43 | 417 | 390 | + alpha-amylase | ||
| TIGR01418 | PEP_synth | 1.0e-13 | 973 | 1278 | 346 | + phosphoenolpyruvate synthase. Also called pyruvate,water dikinase and PEP synthase. The member from Methanococcus jannaschii contains a large intein. This enzyme generates phosphoenolpyruvate (PEP) from pyruvate, hydrolyzing ATP to AMP and releasing inorganic phosphate in the process. The enzyme shows extensive homology to other enzymes that use PEP as substrate or product. This enzyme may provide PEP for gluconeogenesis, for PTS-type carbohydrate transport systems, or for other processes [Energy metabolism, Glycolysis/gluconeogenesis]. | ||
| PRK06464 | PRK06464 | 3.0e-14 | 1081 | 1277 | 212 | + phosphoenolpyruvate synthase; Validated | ||
| PRK06241 | PRK06241 | 4.0e-17 | 961 | 1277 | 359 | + phosphoenolpyruvate synthase; Validated | ||
| pfam01326 | PPDK_N | 8.0e-33 | 971 | 1278 | 335 | + Pyruvate phosphate dikinase, PEP/pyruvate binding domain. This enzyme catalyzes the reversible conversion of ATP to AMP, pyrophosphate and phosphoenolpyruvate (PEP). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005524 | ATP binding |
| GO:0016301 | kinase activity |
| GO:0016310 | phosphorylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAO42141.1 | 0 | 1 | 1279 | 1 | 1278 | unknown protein [Arabidopsis thaliana] |
| EMBL | CAB45080.1 | 0 | 19 | 1279 | 32 | 1288 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_194176.3 | 0 | 1 | 1279 | 1 | 1278 | PWD (PHOSPHOGLUCAN, WATER DIKINASE); ATP binding / kinase [Arabidopsis thaliana] |
| Swiss-Prot | Q9STV0 | 0 | 1 | 1279 | 1 | 1278 | GWD2_ARATH RecName: Full=Alpha-glucan water dikinase 2; Flags: Precursor |
| RefSeq | XP_002527361.1 | 0 | 1 | 1279 | 1 | 1228 | alpha-glucan water dikinase, chloroplast precursor, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation II | RXN-12203 | EC-2.7.9.4 | α-glucan, water dikinase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777523 | 903 | 397 | 1280 | 0 |
| HO794398 | 757 | 543 | 1280 | 0 |
| HO794398 | 142 | 402 | 543 | 0 |
| EX125138 | 284 | 936 | 1217 | 0 |
| HO644248 | 455 | 832 | 1280 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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