| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra013877 |
| Family | AA1 |
| Protein Properties | Length: 598 Molecular Weight: 66561.5 Isoelectric Point: 7.4632 |
| Chromosome | Chromosome/Scaffold: 01 Start: 8200478 End: 8203046 |
| Description | SKU5 similar 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 53 | 522 | 0 |
| QQVIAVNGQFPGPLLNATTNYNVVVRVFNNLDESLLLTWSGIQMRRNSWQDGVLGTNCPIPPRWNFTYQFQVKDQIGSFFYSPSLNFQRASGGFGPIVVN NRNIIPIPFPQPDGEIIFMIGDWYTQDHKALRKILDSGKELGMPDGVLINGKGPYKYNSSVPDGIEYLTAHVDPGKTYRIRVHNVGISTSLNFRIQNHNL LLVETDGHYTSQTNFTDFDIHVGQSYSFLVTMDQNATSDYYIVASARFVNETVWQRVTGVGILHYSNSNGPASGPLPVPKTDVSAPWSAMTQPRAIRQNT SASGARPNPQGSFHYGQINITNTYILRSLPPTMINGSLRATLNGISFVHPITPVRLADRNKVKGAYKLDFPDRPFDSRPPRLDISMINATYKGFIQVVFQ NNDTKMQSFHVDGYTFFVVGMDFGVWTEDKKGSYNNYDAISRSTIEVYPGGWTAGLISLDNVGVWNIRVE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 598 Download |
| MATVSLHFSS PSSALASLLC FLLLSGVSFA ADPFVSYDFK LSYITASPLG VPQQVIAVNG 60 QFPGPLLNAT TNYNVVVRVF NNLDESLLLT WSGIQMRRNS WQDGVLGTNC PIPPRWNFTY 120 QFQVKDQIGS FFYSPSLNFQ RASGGFGPIV VNNRNIIPIP FPQPDGEIIF MIGDWYTQDH 180 KALRKILDSG KELGMPDGVL INGKGPYKYN SSVPDGIEYL TAHVDPGKTY RIRVHNVGIS 240 TSLNFRIQNH NLLLVETDGH YTSQTNFTDF DIHVGQSYSF LVTMDQNATS DYYIVASARF 300 VNETVWQRVT GVGILHYSNS NGPASGPLPV PKTDVSAPWS AMTQPRAIRQ NTSASGARPN 360 PQGSFHYGQI NITNTYILRS LPPTMINGSL RATLNGISFV HPITPVRLAD RNKVKGAYKL 420 DFPDRPFDSR PPRLDISMIN ATYKGFIQVV FQNNDTKMQS FHVDGYTFFV VGMDFGVWTE 480 DKKGSYNNYD AISRSTIEVY PGGWTAGLIS LDNVGVWNIR VENLDRWYLG EETYMRIINP 540 EENGQTEMDP PGNVLYCGAL RNMQKDQHHS AATSILNGHL KLMFSMLMAL LALVFTF* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02991 | PLN02991 | 4.0e-169 | 29 | 572 | 544 | + oxidoreductase | ||
| PLN02835 | PLN02835 | 1.0e-176 | 30 | 558 | 529 | + oxidoreductase | ||
| PLN00044 | PLN00044 | 0 | 30 | 569 | 545 | + multi-copper oxidase-related protein; Provisional | ||
| PLN02354 | PLN02354 | 0 | 30 | 571 | 545 | + copper ion binding / oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 28 | 561 | 548 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA23065.1 | 0 | 9 | 565 | 2 | 558 | Pollen-specific protein precursor like [Arabidopsis thaliana] |
| RefSeq | NP_194254.2 | 0 | 9 | 579 | 2 | 572 | SKS1 (SKU5 SIMILAR 1); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_199961.1 | 0 | 23 | 597 | 16 | 591 | SKS2 (SKU5 SIMILAR 2); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002318885.1 | 0 | 18 | 597 | 14 | 592 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510943.1 | 0 | 18 | 597 | 11 | 591 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 37 | 530 | 6 | 516 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 1asq_A | 0 | 37 | 530 | 6 | 516 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 1asp_B | 0 | 37 | 530 | 6 | 516 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 1asp_A | 0 | 37 | 530 | 6 | 516 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 1aso_B | 0 | 37 | 530 | 6 | 516 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
