| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra013938 |
| Family | AA2 |
| Protein Properties | Length: 327 Molecular Weight: 35273.6 Isoelectric Point: 6.0472 |
| Chromosome | Chromosome/Scaffold: 01 Start: 8552620 End: 8554610 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 53 | 309 | 0 |
| DPNLPAILLRLHFHDCFVEGCDGSILVDNGAISEKFAFGHEGVRGFEIIEAVKAEVEAACPGVVSCADIVALAARDAISLANGPAYEVPTGRRDGRVSNL SLAKDMPDVSDSIEILKDKFMQKGLHAKELVLLSAAHTIGTTACFFMTKRLYSFLPGGQPDPTINPVFLPELTTQCPQNGDVNTRIPMDRSSERVFDKQI LQNIKDGFAVLQTDAGLYEDEATRRIVNSYVGLLNPLFGPSFESDFVKAMVKMGKIN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 327 Download |
| MVWTKAKVNL ALSLVIIFLG ISVADLKVGF YSNTCPQAES IVKRVVSGAS LSDPNLPAIL 60 LRLHFHDCFV EGCDGSILVD NGAISEKFAF GHEGVRGFEI IEAVKAEVEA ACPGVVSCAD 120 IVALAARDAI SLANGPAYEV PTGRRDGRVS NLSLAKDMPD VSDSIEILKD KFMQKGLHAK 180 ELVLLSAAHT IGTTACFFMT KRLYSFLPGG QPDPTINPVF LPELTTQCPQ NGDVNTRIPM 240 DRSSERVFDK QILQNIKDGF AVLQTDAGLY EDEATRRIVN SYVGLLNPLF GPSFESDFVK 300 AMVKMGKINV KTGSNGEIRR VCSAFN* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00314 | plant_peroxidase_like | 6.0e-14 | 60 | 307 | 284 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
| pfam00141 | peroxidase | 1.0e-52 | 42 | 191 | 151 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 1.0e-106 | 13 | 326 | 322 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 5.0e-145 | 26 | 325 | 302 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL93153.1 | 0 | 12 | 326 | 9 | 323 | AF485267_1 class III peroxidase [Gossypium hirsutum] |
| EMBL | CBI20039.1 | 0 | 10 | 326 | 4 | 323 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_194328.1 | 0 | 1 | 326 | 46 | 371 | cationic peroxidase, putative [Arabidopsis thaliana] |
| Swiss-Prot | Q9SZH2 | 0 | 1 | 326 | 1 | 326 | PER43_ARATH RecName: Full=Peroxidase 43; Short=Atperox P43; Flags: Precursor |
| RefSeq | XP_002270950.1 | 0 | 24 | 326 | 26 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1qo4_A | 0 | 26 | 326 | 3 | 304 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| PDB | 1pa2_A | 0 | 26 | 326 | 3 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1qgj_B | 0 | 31 | 326 | 7 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1qgj_A | 0 | 31 | 326 | 7 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 3atj_B | 0 | 26 | 326 | 3 | 306 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
