| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra014349 |
| Family | GT8 |
| Protein Properties | Length: 632 Molecular Weight: 72649.7 Isoelectric Point: 9.3268 |
| Chromosome | Chromosome/Scaffold: 08 Start: 1478515 End: 1481295 |
| Description | galacturonosyltransferase 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 293 | 603 | 0 |
| CLPLRLTTDYYALNSSEQQFPNQEKLEDNQLYHYALFSDNVLATSVVVNSTIANAKHPSKHVFHIVTDRLNYAAMRMWFLDNPPGKATIQVQNVEEFTWL NSSYSPVLKQLSSRSMIDYYFRAHHANSDTNLKFRNPKYLSILNHLRFYLPEIFPKLSKVLFLDDDIVVQKDLSGLWSVDLKGNVNGAVETCGESFHRFD RYLNFSNPLISKNFDPRACGWAYGMNVFDLDEWKRQNITEVYHRWQNLNQDRDLWKLGTLPPGLITFWKRTYPLDRKWHVLGLGYNPSVNQRDIERAAVV HYNGNLKPWLE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 632 Download |
| MVTFRDVVLF FLLLTVAAPI LLYTDSYTSA KTPFSKREFL EDVTALTFNS NENRLNLLHR 60 EESPVDVRRG VVGVVYSKQD SDSSLKARDQ VSARVLKATD DEAQSQTDNT IKQVTDHAAS 120 EMDKPNVMHA SDGNAHNRER MHVQLTQKTS GKVDEQETKG SGAEKESGNV RMPDAQVRHL 180 KDQLIRAKVY LSLPAAKANA HFVRELRLRI KEVQRLVVDA SKDSDLPKNS MEKLKAMEQT 240 LAKGKEIQDD CSTVVKKLRA MLHSAEEQLR VHKKQAMFLT QLTAKTIPKG LHCLPLRLTT 300 DYYALNSSEQ QFPNQEKLED NQLYHYALFS DNVLATSVVV NSTIANAKHP SKHVFHIVTD 360 RLNYAAMRMW FLDNPPGKAT IQVQNVEEFT WLNSSYSPVL KQLSSRSMID YYFRAHHANS 420 DTNLKFRNPK YLSILNHLRF YLPEIFPKLS KVLFLDDDIV VQKDLSGLWS VDLKGNVNGA 480 VETCGESFHR FDRYLNFSNP LISKNFDPRA CGWAYGMNVF DLDEWKRQNI TEVYHRWQNL 540 NQDRDLWKLG TLPPGLITFW KRTYPLDRKW HVLGLGYNPS VNQRDIERAA VVHYNGNLKP 600 WLEIGIPKYR GLWSKHVDYQ HVYLRECNIN P* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02829 | PLN02829 | 0 | 17 | 631 | 624 | + Probable galacturonosyltransferase | ||
| PLN02910 | PLN02910 | 0 | 174 | 630 | 461 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02718 | PLN02718 | 0 | 18 | 629 | 622 | + Probable galacturonosyltransferase | ||
| PLN02742 | PLN02742 | 0 | 135 | 629 | 501 | + Probable galacturonosyltransferase | ||
| PLN02523 | PLN02523 | 0 | 184 | 631 | 479 | + galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB11325.1 | 0 | 1 | 631 | 1 | 615 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_568688.1 | 0 | 1 | 631 | 2 | 616 | GAUT4 (Galacturonosyltransferase 4); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002308736.1 | 0 | 4 | 631 | 3 | 648 | glycosyltransferase [Populus trichocarpa] |
| RefSeq | XP_002329942.1 | 0 | 4 | 631 | 24 | 665 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
| RefSeq | XP_002525229.1 | 0 | 4 | 631 | 5 | 647 | Glycosyltransferase QUASIMODO1, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ga8_A | 0.0005 | 428 | 601 | 75 | 252 | A Chain A, Crystal Structure Of The Vibrio Cholerae Cytolysin (Hlya) Pro-Toxin With Octylglucoside Bound |
| PDB | 1g9r_A | 0.0005 | 428 | 601 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 1ss9_A | 0.001 | 428 | 601 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
