| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra014374 |
| Family | CE16 |
| Protein Properties | Length: 386 Molecular Weight: 42610.4 Isoelectric Point: 7.4954 |
| Chromosome | Chromosome/Scaffold: 08 Start: 1308835 End: 1312747 |
| Description | GDSL-like Lipase/Acylhydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE16 | 36 | 331 | 8.6e-22 |
| LFTFGDSNFDAGNKQTLTKTNVAQSFWPYGKSRDDPNGKFSDGFIAPDFLAKFMGIPIEIPPALVPNVNVSRGASFAVADATLLGAPVESLTLSQQVRKF NQMKANWNDDFIKKSAFLIYIGANDYLNFSKNNPNADASAQQAFVTSVTNKLKNDISLLYSSGASKFVIQTLAPLGCLPIVRQEYNTGMEKCHEPLNDLA KQHNEKIGPMLNEMARTTPGFQFTVFDFYDAIIRRTQKPSSYRFFMTNSSCCGIGTHDAYGCGLPNVHVRLCEYQRSYLFFDGRHNTEKAQEMFAH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 386 Download |
| MASNCNLVSV LGLLLVLTLM HNPVTVAGQR NSGAALFTFG DSNFDAGNKQ TLTKTNVAQS 60 FWPYGKSRDD PNGKFSDGFI APDFLAKFMG IPIEIPPALV PNVNVSRGAS FAVADATLLG 120 APVESLTLSQ QVRKFNQMKA NWNDDFIKKS AFLIYIGAND YLNFSKNNPN ADASAQQAFV 180 TSVTNKLKND ISLLYSSGAS KFVIQTLAPL GCLPIVRQEY NTGMEKCHEP LNDLAKQHNE 240 KIGPMLNEMA RTTPGFQFTV FDFYDAIIRR TQKPSSYRFF MTNSSCCGIG THDAYGCGLP 300 NVHVRLCEYQ RSYLFFDGRH NTEKAQEMFA HLLIGADKNV IQPMNVRELV VYPVDEPMTE 360 VWVPTTSATV QARESRSSSH GYESY* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3240 | COG3240 | 6.0e-10 | 39 | 330 | 318 | + Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] | ||
| pfam00657 | Lipase_GDSL | 4.0e-27 | 36 | 333 | 315 | + GDSL-like Lipase/Acylhydrolase. | ||
| cd01846 | fatty_acyltransferase_like | 6.0e-30 | 36 | 330 | 298 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. | ||
| PLN03156 | PLN03156 | 8.0e-35 | 35 | 342 | 334 | + GDSL esterase/lipase; Provisional | ||
| cd01837 | SGNH_plant_lipase_like | 6.0e-91 | 35 | 337 | 317 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006629 | lipid metabolic process |
| GO:0016788 | hydrolase activity, acting on ester bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD25773.1 | 0 | 1 | 377 | 1 | 388 | AC006577_9 Belongs to the PF |
| GenBank | AAM64922.1 | 0 | 1 | 385 | 1 | 390 | myrosinase-associated protein, putative [Arabidopsis thaliana] |
| GenBank | AAM67268.1 | 0 | 1 | 385 | 1 | 385 | myrosinase-associated protein, putative [Arabidopsis thaliana] |
| RefSeq | NP_175802.1 | 0 | 1 | 385 | 2 | 391 | myrosinase-associated protein, putative [Arabidopsis thaliana] |
| RefSeq | NP_564647.1 | 0 | 1 | 385 | 2 | 386 | myrosinase-associated protein, putative [Arabidopsis thaliana] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| methyl indole-3-acetate interconversion | RXN-10711 | EC-3.1.1.1 | carboxylesterase |
| salicortin biosynthesis | RXN-12253 | EC-3.1.1.1 | carboxylesterase |
